RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 LIN54Q6MZP7 749 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TUBA3EQ6PEY2 450 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 FAM111BQ6SJ93 734 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 BBS12Q6ZW61 710 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF720Q7Z2F6 126 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TRAPPC11Q7Z392 1133 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 DSG4Q86SJ6 1040 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 RASGRP3Q8IV61 690 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SRRM1Q8IYB3 904 aaKnown RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 GPD1LQ8N335 351 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 FBXO39Q8N4B4 442 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 PDILTQ8N807 584 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SLC2A14Q8TDB8 520 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 ABHD5Q8WTS1 349 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TFAP2CQ92754 450 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 KLK6Q92876 244 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 HVCN1Q96D96 273 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 MED15Q96RN5 788 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SMOQ99835 787 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SEMA3CQ99985 751 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 CBWD1Q9BRT8 395 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SLC2A11Q9BYW1 496 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TRIM5Q9C035 493 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 RSPH9Q9H1X1 276 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TMEM245Q9H330 911 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SMYD3Q9H7B4 428 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 NMUR1Q9HB89 426 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 EPB41L5Q9HCM4 733 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF71Q9NQZ8 489 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 FAM49BQ9NUQ9 324 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 COMMD8Q9NX08 183 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 OSER1Q9NX31 292 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 IL37Q9NZH6 218 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 IFT80Q9P2H3 777 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 GGA2Q9UJY4 613 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 AGO1Q9UL18 857 aaKnown RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SCML2Q9UQR0 700 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TTLL3Q9Y4R7 772 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 ENTPD2Q9Y5L3 495 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 UBE4BO95155 1302 aa4.61□□□□□ -1.67
PTPRK-210ENST00000415055 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
PTPRK-210ENST00000415055 TNRC6AQ8NDV7 1962 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CHD5Q8TDI0 1954 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 SHANK1Q9Y566 2161 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 PKDREJQ9NTG1 2253 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 FAM92AA1XBS5 289 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CLEC18AA5D8T8 446 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 VPS37CA5D8V6 355 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 A6NLC8 198 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 TMEM233B4DJY2 109 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 FCHO1O14526 889 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 TBL1XO60907 577 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 PIAS2O75928 621 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 GP1BAP07359 652 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ADH4P08319 380 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 HGFP14210 728 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 PRLRP16471 622 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 GOT1P17174 413 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ELAVL4P26378 380 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 MST1P26927 711 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 HOXD9P28356 352 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 HLA-FP30511 346 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ATICP31939 592 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 PTDSS1P48651 473 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 HARS2P49590 506 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 NUMBP49757 651 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 LOXL3P58215 753 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 MYL6P60660 151 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF844Q08AG5 666 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 OVGP1Q12889 678 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 DRAP1Q14919 205 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 TIGD6Q17RP2 521 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF699Q32M78 642 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 MPPE1Q53F39 396 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 SETMARQ53H47 684 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 FAM180BQ6P0A1 224 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 GUSBP11Q6P575 273 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CLEC18BQ6UXF7 455 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 PTAR1Q7Z6K3 402 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 IQCHQ86VS3 1027 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CBWD2Q8IUF1 395 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ELOA2Q8IYF1 753 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 STK40Q8N2I9 435 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CLEC18CQ8NCF0 446 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 FAM46DQ8NEK8 389 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ZMIZ2Q8NF64 920 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF483Q8TF39 744 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 LARP4BQ92615 738 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 RAD54LQ92698 747 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 CCDC127Q96BQ5 260 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 TMA16Q96EY4 203 aaKnown RBP4.6□□□□□ -1.67
PTPRK-210ENST00000415055 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 FIZ1Q96SL8 496 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 STRADBQ9C0K7 418 aa4.6□□□□□ -1.67
PTPRK-210ENST00000415055 ZNF703Q9H7S9 590 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms