RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ZNF514Q96K75 400 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM79Q9BSE2 394 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 CCDC106Q9BWC9 280 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SLC12A9Q9BXP2 914 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 NMUR2Q9GZQ4 415 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF385DQ9H6B1 395 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 MEAF6Q9HAF1 191 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ZBTB26Q9HCK0 441 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 GULP1Q9UBP9 304 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 DUSP12Q9UNI6 340 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ASB1Q9Y576 335 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TNPO3Q9Y5L0 923 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 CEP192Q8TEP8 1941 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 C17orf113A0A1B0GUU1 675 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM202A6NGA9 273 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 OR2AG2A6NM03 316 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TRPC5OSA6NMA1 111 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 CHUKO15111 745 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SNX2O60749 519 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 PSIP1O75475 530 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 RNASEH2AO75792 299 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 DNAJC8O75937 253 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 UNC5CO95185 931 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 JUNP05412 331 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 T-ENOLP0DO92 83 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 VCLP18206 1134 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 GGT5P36269 586 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TRIM23P36406 574 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 MAPK9P45984 424 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 AGTR2P50052 363 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 NCALDP61601 193 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 RPS21P63220 83 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SH3BP2P78314 561 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ACTN3Q08043 901 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 CDC16Q13042 620 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TBCCQ15814 346 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SULT1C3Q6IMI6 304 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM92Q6UXU6 159 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 FRA10AC1Q70Z53 315 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ASRGL1Q7L266 308 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 KBTBD6Q86V97 674 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF547Q8IVP9 402 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SLC22A15Q8IZD6 547 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 BEND7Q8N7W2 519 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 RPLP0P6Q8NHW5 317 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ELMO1Q92556 727 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 RHBDF1Q96CC6 855 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 NSUN5Q96P11 429 aaKnown RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 SLC6A17Q9H1V8 727 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 FBXL12Q9NXK8 326 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 CD274Q9NZQ7 290 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 ATXN10Q9UBB4 475 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 EML5Q05BV3 1969 aa5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TP53BP1Q12888 1972 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM233B4DJY2 109 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CHURC1-FNTBB4DL54 471 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 MAN2B1O00754 1011 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 SDHDO14521 159 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 LIN7AO14910 233 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 ATP5HO75947 161 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 MLYCDO95822 493 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 S100BP04271 92 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 GPR89BP0CG08 455 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 FOSL2P15408 326 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CDK3Q00526 305 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 BTKQ06187 659 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 IRF4Q15306 451 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PTCRAQ6ISU1 281 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM220Q6QAJ8 160 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 C11orf96Q7Z7L8 435 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CACUL1Q86Y37 369 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 KLHDC8AQ8IYD2 350 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TCAIMQ8N3R3 496 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CHCHD4Q8N4Q1 142 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 AFAP1L2Q8N4X5 818 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 OXR1Q8N573 874 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 ACTRT2Q8TDY3 377 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PTCD3Q96EY7 689 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 MRGPRX1Q96LB2 322 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF382Q96SR6 550 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PARVBQ9HBI1 364 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 LNPEPQ9UIQ6 1025 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF225Q9UK10 706 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PDE10AQ9Y233 779 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 STK38LQ9Y2H1 464 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TRAF6Q9Y4K3 522 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 EYSQ5T1H1 3165 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NCF1BA6NI72 391 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NCF1CA8MVU1 366 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 HNRNPCL1O60812 293 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 RNGTTO60942 597 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TPPPO94811 219 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PCDH8O95206 1070 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 IGLV3-19P01714 112 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CHRNB1P11230 501 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NCF1P14598 390 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF8P17098 575 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NDUFV2P19404 249 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms