RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 PLD2O14939 933 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 CDH16O75309 829 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 TPH1P17752 444 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 RBMS1P29558 406 aaKnown RBP16.18■□□□□ 0.18
CGREF1-205ENST00000404694 CSF2RBP32927 897 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 CTSCP53634 463 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 PCBP4P57723 403 aaKnown RBP16.18■□□□□ 0.18
CGREF1-205ENST00000404694 CRADDP78560 199 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 GPLD1P80108 840 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 NFATC2Q13469 925 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 POU6F1Q14863 301 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 NKAIN2Q5VXU1 208 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 ZNF574Q6ZN55 896 aaPredicted RBP16.18■□□□□ 0.18
CGREF1-205ENST00000404694 USP53Q70EK8 1073 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 SLC9B2Q86UD5 537 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 RASGEF1AQ8N9B8 481 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 SLC38A3Q99624 504 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 ASB8Q9H765 288 aa16.18■□□□□ 0.18
CGREF1-205ENST00000404694 PIH1D1Q9NWS0 290 aaKnown RBP16.18■□□□□ 0.18
CGREF1-205ENST00000404694 SCHIP1Q9P0W5 487 aaPredicted RBP16.18■□□□□ 0.18
CGREF1-205ENST00000404694 OR2AG2A6NM03 316 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 AGAP14A8MT82 685 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 CDRT15L2A8MXV6 281 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 H3BQF6 201 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 RRP8O43159 456 aaKnown RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 TNFSF15O95150 251 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 SHBGP04278 402 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 ITGA2BP08514 1039 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 HGFP14210 728 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 PSMA3P25788 255 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 ATP5DP30049 168 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 AKT1P31749 480 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 HADHAP40939 763 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 MLLT3P42568 568 aaPredicted RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 UBE2IP63279 158 aaKnown RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 TMPRSS15P98073 1019 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 ILF2Q12905 390 aaKnown RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 SQSTM1Q13501 440 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 SEPT7Q16181 437 aaKnown RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 SKIDA1Q1XH10 827 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 COL28A1Q2UY09 1125 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 KRT71Q3SY84 523 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 FBXO39Q8N4B4 442 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 ZNF248Q8NDW4 579 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 STYXQ8WUJ0 223 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 ZNF669Q96BR6 464 aaPredicted RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 PGM2Q96G03 612 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
CGREF1-205ENST00000404694 PLAC1Q9HBJ0 212 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 CHRAC1Q9NRG0 131 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 TREX1Q9NSU2 369 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 NSMCE4AQ9NXX6 385 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 CPNE7Q9UBL6 633 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 LOXL2Q9Y4K0 774 aa16.17■□□□□ 0.18
CGREF1-205ENST00000404694 IGHV5-10-1A0A0J9YXX1 117 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 ZCWPW2A0A1B0GU75 182 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 FAM159BA6NKW6 160 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 PDZK1P1A8MUH7 402 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 HMGB1P1B2RPK0 211 aaPredicted RBP16.16■□□□□ 0.18
CGREF1-205ENST00000404694 CCL22O00626 93 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
CGREF1-205ENST00000404694 BRAFP15056 766 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 VCLP18206 1134 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 MSH3P20585 1137 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 IDSP22304 550 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 RPL10P27635 214 aaKnown RBP16.16■□□□□ 0.18
CGREF1-205ENST00000404694 ITPKBP27987 946 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 ABCG1P45844 678 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 CFHR1Q03591 330 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 ACVR1Q04771 509 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 DMPKQ09013 629 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 MGAT5Q09328 741 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 SEPT6Q14141 434 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 LONRF1Q17RB8 773 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 TSTD2Q5T7W7 516 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 AGBL2Q5U5Z8 902 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 KIAA0930Q6ICG6 404 aaPredicted RBP16.16■□□□□ 0.18
CGREF1-205ENST00000404694 TMEM220Q6QAJ8 160 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 LRRC69Q6ZNQ3 347 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 CLEC14AQ86T13 490 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 LRRC6Q86X45 466 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 AVL9Q8NBF6 648 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 OR4D9Q8NGE8 314 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 OR2W6PQ8NHA6 318 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 TMEM159Q96B96 161 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 SH3KBP1Q96B97 665 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 CERS2Q96G23 380 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 CRLS1Q9UJA2 301 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 LHX6Q9UPM6 363 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 IKBKGQ9Y6K9 419 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 ZFYVE26Q68DK2 2539 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 FAM208BQ5VWN6 2430 aa16.16■□□□□ 0.18
CGREF1-205ENST00000404694 H7C0S8 307 aa16.15■□□□□ 0.18
CGREF1-205ENST00000404694 AGRPO00253 132 aa16.15■□□□□ 0.18
CGREF1-205ENST00000404694 DUX1O43812 170 aa16.15■□□□□ 0.18
CGREF1-205ENST00000404694 JMJD7P0C870 316 aa16.15■□□□□ 0.18
CGREF1-205ENST00000404694 XRCC1P18887 633 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms