RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ACP5P13686 325 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 EFNA1P20827 205 aaPredicted RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 NOMO1Q15155 1222 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 GPR107Q5VW38 600 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 RNF43Q68DV7 783 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SERPINA9Q86WD7 417 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF280BQ86YH2 543 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SPPL2CQ8IUH8 684 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 OR2T12Q8NG77 320 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 OR52J3Q8NH60 311 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 HBEGFQ99075 208 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 MTMR11A4FU01 709 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TNFP01375 233 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 HOXB2P14652 356 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 AGXTP21549 392 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TSEN15Q8WW01 171 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PSMG2Q969U7 264 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 IPPKQ9H8X2 491 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TMEM27Q9HBJ8 222 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 RASSF1Q9NS23 344 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 C9J4A7 227 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 NDST3O95803 873 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 CCKBRP32239 447 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 CTSKP43235 329 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 GJA8P48165 433 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PTDSS1P48651 473 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF460Q14592 562 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 ANO7Q6IWH7 933 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PEX5LQ8IYB4 626 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 ADAMTS5Q9UNA0 930 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TLR6Q9Y2C9 796 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TCRBV7S2A1N4TA0A589 114 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 UNC5CO95185 931 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 POLR2JP52435 117 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 GFOD2Q3B7J2 385 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 MBLAC2Q68D91 279 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 SMG9Q9H0W8 520 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 GBA3Q9H227 469 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 MRPS30Q9NP92 439 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 A8MUI8 341 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PSMD9O00233 223 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 FSCN2O14926 492 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 CLDN9O95484 217 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TBX18O95935 607 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 MAPK12P53778 367 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 DRG2P55039 364 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PIK3R6Q5UE93 754 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 SLC8B1Q6J4K2 584 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TCAIMQ8N3R3 496 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 MREGQ8N565 214 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 POC5Q8NA72 575 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 FAM46DQ8NEK8 389 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TWIST2Q8WVJ9 160 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 RNF121Q9H920 327 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 GNEQ9Y223 722 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PRODHO43272 600 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 ANXA4P09525 319 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 YAP1P46937 504 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 WDR5P61964 334 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 MLIPQ5VWP3 458 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF433Q8N7K0 673 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 STYXQ8WUJ0 223 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 C8orf48Q96LL4 319 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 EBF3Q9H4W6 596 aa14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-201ENST00000398640 PRR5-ARHGAP8B1AHC4 643 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 NRP2O60462 931 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GOT2P00505 430 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SLC26A3P40879 764 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ARHGAP8P85298 464 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ECT2LQ008S8 904 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 QPCTQ16769 361 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SNX20Q7Z614 316 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ADAMTS10Q9H324 1103 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 RNF225M0QZC1 329 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 B3GALT2O43825 422 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 C2P06681 752 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 HYAL2Q12891 473 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 LARS2Q15031 903 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SLC30A6Q6NXT4 461 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 DSN1Q9H410 356 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 WDR26Q9H7D7 661 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 LRRC4CQ9HCJ2 640 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 PDP1Q9P0J1 537 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 CPSF4LA6NMK7 179 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SRRM3A6NNA2 597 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 IPO13O94829 963 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 LAMP2P13473 410 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 NDST2P52849 883 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ADARP55265 1226 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms