RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 BCKDHBP21953 392 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 GRK2P25098 689 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 NAGLUP54802 743 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 OCRLQ01968 901 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 USP39Q53GS9 565 aaKnown RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 Q6ZSR6 202 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 OR13H1Q8NG92 308 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 OR56A4Q8NGH8 313 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 SNX19Q92543 992 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 SPACA7Q96KW9 195 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 UTP6Q9NYH9 597 aaKnown RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 PRSS38A1L453 326 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 RPL6Q02878 288 aaKnown RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 PFKFB4Q16877 469 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 PTGR2Q8N8N7 351 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 SKA2Q8WVK7 121 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 WDR92Q96MX6 357 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 CCT8L2Q96SF2 557 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 GPR27Q9NS67 375 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 PNMA8BQ9ULN7 279 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 CEP192Q8TEP8 1941 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 ABCA7Q8IZY2 2146 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 CCDC163A0A0D9SF12 145 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 H2AFYO75367 372 aaKnown RBP26.91■■□□□ 1.9
CPNE1-203ENST00000397442 C8GP07360 202 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 KELP23276 732 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 SLC22A18ASQ8N1D0 253 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 SREK1Q8WXA9 508 aaKnown RBP26.91■■□□□ 1.9
CPNE1-203ENST00000397442 OR1E3Q8WZA6 343 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 L3HYPDHQ96EM0 354 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 SLC12A9Q9BXP2 914 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 FAM107BQ9H098 131 aa26.91■■□□□ 1.9
CPNE1-203ENST00000397442 NCF1BA6NI72 391 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 PRR19A6NJB7 356 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 NCF1CA8MVU1 366 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 LYPLA1O75608 230 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 FAM107AO95990 144 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 GFAPP14136 432 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 NCF1P14598 390 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 CD27P26842 260 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 RABIFP47224 123 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 SLC1A6P48664 564 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 PLOD1Q02809 727 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 DMPKQ09013 629 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 SP140Q13342 867 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 CGB2Q6NT52 195 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 ENPP7Q6UWV6 458 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 SLC36A4Q6YBV0 504 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 FRA10AC1Q70Z53 315 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 CHST15Q7LFX5 561 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-203ENST00000397442 FBXO39Q8N4B4 442 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 PDXPQ96GD0 296 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 TIMM29Q9BSF4 260 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 PITPNM3Q9BZ71 974 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 OR52A5Q9H2C5 316 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 DPEP2Q9H4A9 486 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 RDH14Q9HBH5 336 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 THAP1Q9NVV9 213 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 NUDT4Q9NZJ9 180 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 PDE10AQ9Y233 779 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 DNAJC16Q9Y2G8 782 aa26.9■■□□□ 1.9
CPNE1-203ENST00000397442 KLHL33A6NCF5 533 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 H3BM21 787 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 SLC16A5O15375 505 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 FFAR2O15552 330 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 PSIP1O75475 530 aaKnown RBP26.89■■□□□ 1.9
CPNE1-203ENST00000397442 IMPDH1P20839 514 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 HTR1BP28222 390 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 ASPHQ12797 758 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 ABRQ12979 859 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 METRNLQ641Q3 311 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 UBE2R2Q712K3 238 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-203ENST00000397442 GALNT13Q8IUC8 556 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 MAML2Q8IZL2 1156 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-203ENST00000397442 C7orf26Q96N11 449 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 SLC6A18Q96N87 628 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 SORT1Q99523 831 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 CD274Q9NZQ7 290 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 MOSPD1Q9UJG1 213 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 LRP4O75096 1905 aa26.89■■□□□ 1.9
CPNE1-203ENST00000397442 TMEM114B3SHH9 223 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 TNFRSF10CO14798 259 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 SIX3O95343 332 aaPredicted RBP26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ACP5P13686 325 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 GNPDA1P46926 289 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 THOP1P52888 689 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ALDH18A1P54886 795 aaKnown RBP26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ABCE1P61221 599 aaKnown RBP26.89■■□□□ 1.89
CPNE1-203ENST00000397442 HERVK_113P63132 956 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 RPA4Q13156 261 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ZNF678Q5SXM1 525 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 PDPRQ8NCN5 879 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ERVK-6Q9BXR3 956 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 DRC3Q9H069 523 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 PARVBQ9HBI1 364 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 EIF2B4Q9UI10 523 aaKnown RBP26.89■■□□□ 1.89
CPNE1-203ENST00000397442 TMCO1Q9UM00 188 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 PLEKHM1Q9Y4G2 1056 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 ST14Q9Y5Y6 855 aa26.89■■□□□ 1.89
CPNE1-203ENST00000397442 LRRC14BA6NHZ5 514 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms