RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 AZIN1O14977 448 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 KLHL41O60662 606 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 SKAP2O75563 359 aaPredicted RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 ZNF8P17098 575 aaPredicted RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 RPIAP49247 311 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 CDK3Q00526 305 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 LSM12Q3MHD2 195 aaKnown RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 TMEM259Q4ZIN3 620 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 KANK2Q63ZY3 851 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 PTCRAQ6ISU1 281 aaPredicted RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 METTL2BQ6P1Q9 378 aaKnown RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 USP30Q70CQ3 517 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 TREML1Q86YW5 311 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 TP53I13Q8NBR0 393 aaPredicted RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 TMEM159Q96B96 161 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 PTCD3Q96EY7 689 aaKnown RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 NSL1Q96IY1 281 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 MRGPRX1Q96LB2 322 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 LINC00615Q96LM1 132 aaPredicted RBP17.14■□□□□ 0.33
MBD4-202ENST00000393278 TMEM79Q9BSE2 394 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 C1QTNF2Q9BXJ5 285 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 MMP17Q9ULZ9 603 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 GPR34Q9UPC5 381 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 TRIM33Q9UPN9 1127 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 TRPM6Q9BX84 2022 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
MBD4-202ENST00000393278 A0A1B0GTL3 188 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 HNRNPCL1O60812 293 aaKnown RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 MATN4O95460 622 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ESRRBO95718 433 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ANXA5P08758 320 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 GSTM1P09488 218 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 AOC1P19801 751 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 HSPA7P48741 367 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 GSTM4Q03013 218 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 IRF4Q15306 451 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ASRGL1Q7L266 308 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 GOLGA7Q7Z5G4 137 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 KBTBD6Q86V97 674 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ZNF547Q8IVP9 402 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ZNF382Q96SR6 550 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 TRIM54Q9BYV2 358 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 MBNL1Q9NR56 388 aaKnown RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 WWOXQ9NZC7 414 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 GULP1Q9UBP9 304 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 FAM8A1Q9UBU6 413 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 A0A1W2PQU0 124 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 PRR5-ARHGAP8B1AHC4 643 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 LIN7AO14910 233 aaPredicted RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 RNGTTO60942 597 aaKnown RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 PAK4O96013 591 aaPredicted RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 CYP2A7P20853 494 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 CD72P21854 359 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 PBLDP30039 288 aaPredicted RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 PREPP48147 710 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 FOXA1P55317 472 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 PKNOX1P55347 436 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ARHGAP8P85298 464 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 RBBP7Q16576 425 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 MBOAT1Q6ZNC8 495 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 SYVN1Q86TM6 617 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 LILRA3Q8N6C8 439 aaPredicted RBP17.13■□□□□ 0.33
MBD4-202ENST00000393278 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 TEX101Q9BY14 249 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 CD244Q9BZW8 370 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ARL15Q9NXU5 204 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 LNPEPQ9UIQ6 1025 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 ZNF225Q9UK10 706 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 NCKAP1Q9Y2A7 1128 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 DNAJC15Q9Y5T4 150 aa17.13■□□□□ 0.33
MBD4-202ENST00000393278 C17orf113A0A1B0GUU1 675 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 PRR23AA6NEV1 266 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 MAN2B1O00754 1011 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 HIST1H2AGP0C0S8 130 aaPredicted RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 NDUFV2P19404 249 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 HIST1H2ADP20671 130 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 CALB2P22676 271 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 PRDX3P30048 256 aaKnown RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 TRIM23P36406 574 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 SFSWAPQ12872 951 aaKnown RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 SGCGQ13326 291 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 GTF2H2Q13888 395 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 MLF2Q15773 248 aaPredicted RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 FAM219BQ5XKK7 198 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 GTF2H2CQ6P1K8 395 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 NEK5Q6P3R8 708 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 GPRIN3Q6ZVF9 776 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 HORMAD1Q86X24 394 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 TCAIMQ8N3R3 496 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 ACTRT2Q8TDY3 377 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 KLK6Q92876 244 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms