RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	CYP2R1	Q6VVX0	501 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	RGS9BP	Q6ZS82	235 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	ZSCAN5A	Q9BUG6	496 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	CACYBP	Q9HB71	228 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SGK2	Q9HBY8	427 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	MAGEE1	Q9HCI5	957 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	TMEM51	Q9NW97	253 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC27A6	Q9Y2P4	619 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	TRAF6	Q9Y4K3	522 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	CDH23	Q9H251	3354 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	FAM86C2P	A6NEL3	165 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ZW10	O43264	779 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	C9	P02748	559 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ATXN1L	P0C7T5	689 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	RAB8A	P61006	207 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	LIPM	Q5VYY2	423 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568		Q6ZSR6	202 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF621	Q6ZSS3	439 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	C17orf64	Q86WR6	236 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	TBC1D19	Q8N5T2	526 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	DNAJB14	Q8TBM8	379 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	TXLNG	Q9NUQ3	528 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	NLE1	Q9NVX2	485 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	POLR3H	Q9Y535	204 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568		H7BY64	318 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	SOCS5	O75159	536 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	TCEA1	P23193	301 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ACTN3	Q08043	901 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	7e-7	■■■■■ 33.5
DDR1-225	ENST00000376568	MLF2	Q15773	248 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	DEFB110	Q30KQ9	67 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	FAAH2	Q6GMR7	532 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ZSWIM9	Q86XI8	627 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	BANP	Q8N9N5	519 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	PIH1D2	Q8WWB5	315 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	CCDC126	Q96EE4	140 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC45A3	Q96JT2	553 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	PRAP1	Q96NZ9	151 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	MRPL1	Q9BYD6	325 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	DPY30	Q9C005	99 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	MBTPS2	O43462	519 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	FKBP9	O95302	570 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	EPO	P01588	193 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	HOXA9	P31269	272 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	RPS21	P63220	83 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC25A3	Q00325	362 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	CLC	Q05315	142 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	TMEM259	Q4ZIN3	620 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	MANEAL	Q5VSG8	457 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	FKBP9P1	Q75LS8	142 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	LONP2	Q86WA8	852 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	SYT12	Q8IV01	421 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	AGGF1	Q8N302	714 aa	eCLIP	13.29	□□□□□ -0.28	5e-7	■■■■■ 43.7
DDR1-225	ENST00000376568	ICA1L	Q8NDH6	482 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	WASF2	Q9Y6W5	498 aa		13.29	□□□□□ -0.28
DDR1-225	ENST00000376568	FAM92A	A1XBS5	289 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	CCDC160	A6NGH7	325 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	AZIN1	O14977	448 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	ANXA6	P08133	673 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	RPSA	P08865	295 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	ALPPL2	P10696	532 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	DRD1	P21728	446 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	TIGD2	Q4W5G0	525 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	MPP7	Q5T2T1	576 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	FBXO30	Q8TB52	745 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	PATE1	Q8WXA2	126 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	HIC2	Q96JB3	615 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	FSCN3	Q9NQT6	498 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	PCDHB1	Q9Y5F3	818 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	DGKB	Q9Y6T7	804 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	GRXCR2	A6NFK2	248 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	GLOD5	A6NK44	160 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	CCT8L1P	A6NM43	557 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	MAN2B1	O00754	1011 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	RFPL1	O75677	317 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	IFNA16	P05015	189 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	OPRD1	P41143	372 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	LRRC32	Q14392	662 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	CYP2A13	Q16696	494 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	DENND5A	Q6IQ26	1287 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	SCML4	Q8N228	414 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	EIF1AD	Q8N9N8	165 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	SEC14L1	Q92503	715 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	MBNL1	Q9NR56	388 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	CDC123	O75794	336 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	PDK4	Q16654	411 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	CACHD1	Q5VU97	1274 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	FBXW10	Q5XX13	1052 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	TRIM73	Q86UV7	250 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC30A3	Q99726	388 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	EQTN	Q9NQ60	294 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	HSFX1	Q9UBD0	423 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	APOBEC3B	Q9UH17	382 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	FBXW2	Q9UKT8	454 aa		13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	EIF3L	Q9Y262	564 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF638	Q14966	1978 aa	Known RBP	13.27	□□□□□ -0.28
DDR1-225	ENST00000376568	DNAJC13	O75165	2243 aa		13.27	□□□□□ -0.28

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