RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ADGRG2Q8IZP9 1017 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 CMTM8Q8IZV2 173 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 METTL25Q8N6Q8 603 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 DGCR14Q96DF8 476 aaKnown RBP28.42■■■□□ 2.14
SSBP3-204ENST00000371320 GRIP2Q9C0E4 1043 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 PADI4Q9UM07 663 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 COMMD3-BMI1R4GMX3 469 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 KANSL1LA0AUZ9 987 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ARHGAP10A1A4S6 786 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 IFRD1O00458 451 aaPredicted RBP28.41■■■□□ 2.14
SSBP3-204ENST00000371320 RGS14O43566 566 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 HTR1EP28566 365 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 NSG1P42857 185 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 PLOD1Q02809 727 aaPredicted RBP28.41■■■□□ 2.14
SSBP3-204ENST00000371320 NADK2Q4G0N4 442 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 LRRC66Q68CR7 880 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 CWF19L1Q69YN2 538 aaKnown RBP28.41■■■□□ 2.14
SSBP3-204ENST00000371320 PRR23BQ6ZRT6 265 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 SCRN2Q96FV2 425 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 PIF1Q9H611 641 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 CCL27Q9Y4X3 112 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 K7EPI3 171 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ARNTLO00327 626 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 FFAR3O14843 346 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ANKRD28O15084 1053 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 GPR42O15529 346 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ETS2P15036 469 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 CRY1Q16526 586 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 DLEU7Q6UYE1 221 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 EPHX4Q8IUS5 362 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 UBTD2Q8WUN7 234 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ISG20Q96AZ6 181 aaKnown RBP28.41■■■□□ 2.14
SSBP3-204ENST00000371320 C9orf16Q9BUW7 83 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ANKRD60Q9BZ19 345 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 SMG9Q9H0W8 520 aaKnown RBP28.41■■■□□ 2.14
SSBP3-204ENST00000371320 RDH14Q9HBH5 336 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 ANAPC2Q9UJX6 822 aa28.41■■■□□ 2.14
SSBP3-204ENST00000371320 CARNS1A5YM72 827 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 AGAP14A8MT82 685 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 PDLIM1O00151 329 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 NRG2O14511 850 aaPredicted RBP28.4■■■□□ 2.14
SSBP3-204ENST00000371320 UMPSP11172 480 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 JAK1P23458 1154 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 RFC2P35250 354 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 PPM1AP35813 382 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 PIK3CGP48736 1102 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 DGKQP52824 942 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 SLC5A9Q2M3M2 681 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 USP45Q70EL2 814 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 PROSER1Q86XN7 944 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 PPM1MQ96MI6 270 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 SUV39H2Q9H5I1 410 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 KCTD5Q9NXV2 234 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 ZDHHC3Q9NYG2 299 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 USP22Q9UPT9 525 aa28.4■■■□□ 2.14
SSBP3-204ENST00000371320 MNX1P50219 401 aaPredicted RBP28.39■■■□□ 2.14
SSBP3-204ENST00000371320 CCT8P50990 548 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 RPL38P63173 70 aaKnown RBP28.39■■■□□ 2.14
SSBP3-204ENST00000371320 RBM44Q6ZP01 1051 aaKnown RBP28.39■■■□□ 2.14
SSBP3-204ENST00000371320 MFSD2AQ8NA29 543 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 TFAP2CQ92754 450 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 VOPP1Q96AW1 172 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 KLQ9UEF7 1012 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 EIF3LQ9Y262 564 aaKnown RBP28.39■■■□□ 2.14
SSBP3-204ENST00000371320 SCN8AQ9UQD0 1980 aa28.39■■■□□ 2.14
SSBP3-204ENST00000371320 SLC28A1O00337 649 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 RSL1D1O76021 490 aaKnown RBP28.39■■■□□ 2.13
SSBP3-204ENST00000371320 VARSP26640 1264 aaKnown RBP28.39■■■□□ 2.13
SSBP3-204ENST00000371320 METTL2BQ6P1Q9 378 aaKnown RBP28.39■■■□□ 2.13
SSBP3-204ENST00000371320 RALGPS2Q86X27 583 aaPredicted RBP28.39■■■□□ 2.13
SSBP3-204ENST00000371320 GPR65Q8IYL9 337 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 NUDT8Q8WV74 236 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 LMLNQ96KR4 655 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 COPS8Q99627 209 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 PNPLA3Q9NST1 481 aa28.39■■■□□ 2.13
SSBP3-204ENST00000371320 RNF103-CHMP3A0A140T963 221 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ULK1O75385 1050 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 H6PDO95479 791 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 EPB42P16452 691 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ADRM1Q16186 407 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 AAK1Q2M2I8 961 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 C22orf39Q6P5X5 142 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ECHDC3Q96DC8 303 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 YME1L1Q96TA2 773 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ZBTB18Q99592 522 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 CGREF1Q99674 301 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 SLC46A2Q9BY10 475 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ZBP1Q9H171 429 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 FARSBQ9NSD9 589 aaKnown RBP28.38■■■□□ 2.13
SSBP3-204ENST00000371320 HS3ST2Q9Y278 367 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 EBLN1P0CF75 366 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 CBSLP0DN79 551 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 HRH2P25021 359 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 HLA-FP30511 346 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 CBSP35520 551 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 NR1H2P55055 460 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 OR4D2P58180 307 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 WDR5P61964 334 aaKnown RBP28.38■■■□□ 2.13
SSBP3-204ENST00000371320 PTSQ03393 145 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 MAD2L1Q13257 205 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms