RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ABCB8Q9NUT2 735 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 DNAJC17Q9NVM6 304 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 USP36Q9P275 1121 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 GGA2Q9UJY4 613 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 INTS6Q9UL03 887 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 SPEGQ15772 3267 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CACNA1HO95180 2353 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 NYNRINQ9P2P1 1898 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 A0A0A0MRY4 1105 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CXorf51AA0A1B0GTR3 108 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 KANSL1LA0AUZ9 987 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 TMEM233B4DJY2 109 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 GPR89AB7ZAQ6 455 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 H7C0C1 242 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 MATN3O15232 486 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PRAMEF11O60813 436 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CLEC3AO75596 197 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF189O75820 626 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 TMEM63AO94886 807 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 GPR89BP0CG08 455 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 COL6A2P12110 1019 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 GLDCP23378 1020 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 RBL1P28749 1068 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 LSP1P33241 339 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PTGIRP43119 386 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 MANFP55145 182 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CASP9P55211 416 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 NME5P56597 212 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ARF5P84085 180 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PMP22Q01453 160 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 LRRC14Q15048 493 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CLPPQ16740 277 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 KRT71Q3SY84 523 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 FUT11Q495W5 492 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 TMEM215Q68D42 235 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CCDC137Q6PK04 289 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 LRIG3Q6UXM1 1119 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ATG14Q6ZNE5 492 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 UBE3DQ7Z6J8 389 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CDKL3Q8IVW4 592 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CCDC105Q8IYK2 499 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CARFQ8N187 725 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 MMGT1Q8N4V1 131 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ALLCQ8N6M5 410 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF321PQ8N8H1 164 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CCNYQ8ND76 341 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 GANCQ8TET4 914 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 WFIKKN2Q8TEU8 576 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 FAM3CQ92520 227 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ERLEC1Q96DZ1 483 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF599Q96NL3 588 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PNKPQ96T60 521 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 KRT12Q99456 494 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PRPF18Q99633 342 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 VRK1Q99986 396 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 C1QTNF1Q9BXJ1 281 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 CACNG6Q9BXT2 260 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 DDX47Q9H0S4 455 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 C8orf33Q9H7E9 229 aaPredicted RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 MAGEE1Q9HCI5 957 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 LTB4R2Q9NPC1 389 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 SLC35D1Q9NTN3 355 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 SH3BP4Q9P0V3 963 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 DLGAP2Q9P1A6 1054 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 DEC1Q9P2X7 70 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 PCYOX1Q9UHG3 505 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 IPO11Q9UI26 975 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF148Q9UQR1 794 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 NEU2Q9Y3R4 380 aa5.11□□□□□ -1.59
VCAM1-202ENST00000347652 MYO18AQ92614 2054 aaKnown RBP5.11□□□□□ -1.59
VCAM1-202ENST00000347652 KIAA1549LQ6ZVL6 1849 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 CHD5Q8TDI0 1954 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 SOCS6O14544 535 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 SNAP91O60641 907 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 CD160O95971 181 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 EGFP01133 1207 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 CTSBP07858 339 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 GSTP1P09211 210 aaKnown RBP5.1□□□□□ -1.59
VCAM1-202ENST00000347652 GALK1P51570 392 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 CARD18P57730 90 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 GABPB1Q06547 395 aaPredicted RBP5.1□□□□□ -1.59
VCAM1-202ENST00000347652 ELP6Q0PNE2 266 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 SMU1Q2TAY7 513 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 NHSL2Q5HYW2 709 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 TMEM201Q5SNT2 666 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 GRAMD4Q6IC98 578 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 TIGD7Q6NT04 549 aaPredicted RBP5.1□□□□□ -1.59
VCAM1-202ENST00000347652 ADGRD1Q6QNK2 874 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 UNQ6494/PRO21346Q6UXR6 183 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 SYT13Q7L8C5 426 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 BMP8AQ7Z5Y6 402 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 RALGPS2Q86X27 583 aaPredicted RBP5.1□□□□□ -1.59
VCAM1-202ENST00000347652 CXorf67Q86X51 503 aaPredicted RBP5.1□□□□□ -1.59
VCAM1-202ENST00000347652 KLHL7Q8IXQ5 586 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 TEX26Q8N6G2 289 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 DCAF4L2Q8NA75 395 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 GALNT6Q8NCL4 622 aa5.1□□□□□ -1.59
VCAM1-202ENST00000347652 SLC5A11Q8WWX8 675 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms