RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MANFP55145 182 aaKnown RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 SULT2A1Q06520 285 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 FAM151BQ6UXP7 276 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 CERS6Q6ZMG9 384 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 ZNF431Q8TF32 576 aaPredicted RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 GPR22Q99680 433 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 TRPS1Q9UHF7 1281 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 GRIP1Q9Y3R0 1128 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 SLC25A14O95258 325 aaPredicted RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 ALDH2P05091 517 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 HUNKP57058 714 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 DPY19L1Q2PZI1 675 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 SH3PXD2AQ5TCZ1 1133 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 ADNP2Q6IQ32 1131 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 IGDCC3Q8IVU1 814 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 PHC2Q8IXK0 858 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 ELMOD2Q8IZ81 293 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 OR10G2Q8NGC3 310 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 IRGQQ8WZA9 623 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 CENPBD1B2RD01 187 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 E7ESA3 106 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 STX16O14662 325 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 PER2O15055 1255 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 CLIC3O95833 236 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 MT-CYBP00156 380 aaPredicted RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 T-ENOLP0DO92 83 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 CDH5P33151 784 aaPredicted RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 SETMARQ53H47 684 aaPredicted RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 FBXO48Q5FWF7 155 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 ITIH5Q86UX2 942 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 ANKRD46Q86W74 232 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 MUS81Q96NY9 551 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 HERC2P3Q9BVR0 1158 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 NIFKQ9BYG3 293 aaKnown RBP17.81■□□□□ 0.44
SMC4-201ENST00000344722 DNMT3LQ9UJW3 386 aa17.81■□□□□ 0.44
SMC4-201ENST00000344722 HPRP00739 348 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 PTPRAP18433 802 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 GTF2E2P29084 291 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 CACNG1Q06432 222 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 TBC1D17Q9HA65 648 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 HSPB11Q9Y547 144 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 A0A0X1KG70 313 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SCAMP3O14828 347 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 FGBP02675 491 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 MYCLP1P12525 358 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 POU2F1P14859 743 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ARF4P18085 180 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 ZNF10P21506 573 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 TMEM236Q5W0B7 351 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SLC25A24Q6NUK1 477 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ZNF730Q6ZMV8 503 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 DNAJB7Q7Z6W7 309 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 GJD3Q8N144 294 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SLC37A3Q8NCC5 494 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 POFUT2Q9Y2G5 429 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SNAPC5O75971 98 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 GSTT2BP0CG30 244 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 HOXA10P31260 410 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 ACSL1P33121 698 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SNRPD1P62314 119 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 CBLBQ13191 982 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 TMEM44Q2T9K0 475 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ZC3HC1Q86WB0 502 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 HTATIP2Q9BUP3 242 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 RPL4P36578 427 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 KBTBD6Q86V97 674 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ALDH16A1Q8IZ83 802 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SPAG16Q8N0X2 631 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 CMAHPQ9Y471 501 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 MNDAP41218 407 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 SWI5Q1ZZU3 235 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 IDNKQ5T6J7 187 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 FAM171A1Q5VUB5 890 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 NCBP2-AS2Q69YL0 99 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 PLEKHG7Q6ZR37 379 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 METTL3Q86U44 580 aaKnown RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 OAFQ86UD1 273 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 COMMD2Q86X83 199 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 CERS5Q8N5B7 392 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ZNF516Q92618 1163 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 TMEM246Q9BRR3 403 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 ZNF717Q9BY31 904 aaPredicted RBP17.8■□□□□ 0.44
SMC4-201ENST00000344722 NFKBIZQ9BYH8 718 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 AMBNQ9NP70 447 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 RNF181Q9P0P0 153 aa17.8■□□□□ 0.44
SMC4-201ENST00000344722 TCAF2A6NFQ2 919 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 GNB5O14775 395 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 CXCR3P49682 368 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 BTBD16Q32M84 506 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 PRR11Q96HE9 360 aaPredicted RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 SIGLEC10Q96LC7 697 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 GTPBP2Q9BX10 602 aaKnown RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 HLA-DQA2P01906 255 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 FPR1P21462 350 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms