RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CENPKQ9BS16 269 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 WRAP53Q9BUR4 548 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 NANOGQ9H9S0 305 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 MAGEE1Q9HCI5 957 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SUN2Q9UH99 717 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TMPRSS11EQ9UL52 423 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TRAV19A0A0A6YYK7 116 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 DHRS12A0PJE2 317 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SEC22BO75396 215 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 GLUD1P00367 558 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 NFKBIAP25963 317 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 MAPK10P53779 464 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 PRKCQQ04759 706 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 CCSMST1Q4G0I0 132 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 LIN52Q52LA3 116 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SPANXN4Q5MJ08 99 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 ANKRD26P1Q6NSI1 321 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 C22orf39Q6P5X5 142 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SNX20Q7Z614 316 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 HS3ST5Q8IZT8 346 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 FBXO30Q8TB52 745 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 FIG4Q92562 907 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNCA-201ENST00000336904 ULK4Q96C45 1275 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 RNF145Q96MT1 663 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 GPATCH1Q9BRR8 931 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 RPF2Q9H7B2 306 aaKnown RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 POPDC3Q9HBV1 291 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 SLC52A3Q9NQ40 469 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 ASAH2Q9NR71 780 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 OPTCQ9UBM4 332 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 ZNF490Q9ULM2 529 aaPredicted RBP8.69□□□□□ -1.02
SNCA-201ENST00000336904 ASB3Q9Y575 518 aa8.69□□□□□ -1.02
SNCA-201ENST00000336904 RNF103-CHMP3A0A140T963 221 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 A0A1B0GVG6 124 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 LSM1O15116 133 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 PFDN6O15212 129 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 MLYCDO95822 493 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 HLA-EP13747 358 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 TYRP14679 529 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 EPCAMP16422 314 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 GSTT1P30711 240 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 SPAM1P38567 509 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ABRQ12979 859 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 PLCL1Q15111 1095 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 CDKN3Q16667 212 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 GSTA3Q16772 222 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 IMPG1Q17R60 797 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 MYLK3Q32MK0 819 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 XKR7Q5GH72 579 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 AARS2Q5JTZ9 985 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 ZFP1Q6P2D0 407 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 RBM44Q6ZP01 1051 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 NXPE1Q8N323 547 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 LIX1Q8N485 282 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 FAM47BQ8NA70 645 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 HERC2P3Q9BVR0 1158 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 FAM126AQ9BYI3 521 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ZDHHC7Q9NXF8 308 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 VAPAQ9P0L0 249 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 DNMT3BQ9UBC3 853 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 GNPTGQ9UJJ9 305 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 OBSL1O75147 1896 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 TANC1Q9C0D5 1861 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 A0A1W2PP18 115 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 TCRBV3S1A0A5B6 114 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 RAD51BO15315 384 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 STAMBPO95630 424 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 C8BP07358 591 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 C1SP09871 688 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 LAG3P18627 525 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 TACR1P25103 407 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 AP1S1P61966 158 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ERVK-8P63133 956 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 RCAN2Q14206 197 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 NADK2Q4G0N4 442 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ARSIQ5FYB1 569 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 C8orf82Q6P1X6 216 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 TBPL2Q6SJ96 375 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 SUSD1Q6UWL2 747 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 HSD11B1LQ7Z5J1 315 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 GRASPQ7Z6J2 395 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 ITIH5Q86UX2 942 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 TICAM1Q8IUC6 712 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 CLEC4FQ8N1N0 589 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 PNPT1Q8TCS8 783 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 LRRC3Q9BY71 257 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 SUV39H2Q9H5I1 410 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 ACTR8Q9H981 624 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 RC3H2Q9HBD1 1191 aaKnown RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 HPS4Q9NQG7 708 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 DDX18Q9NVP1 670 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms