RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MICU2Q8IYU8 434 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 ZNF786Q8N393 782 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 TRAM1L1Q8N609 369 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 ZMIZ2Q8NF64 920 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 UTP15Q8TED0 518 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 RCN3Q96D15 328 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 RBM18Q96H35 190 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 TDRD1Q9BXT4 1180 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 WDR55Q9H6Y2 383 aaPredicted RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 H3BN98 237 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 GTPBP1O00178 669 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 MTX2O75431 263 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 AHSGP02765 367 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 JAK1P23458 1154 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 AFF1P51825 1210 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 NUP107P57740 925 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 HERVK_113P63132 956 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 GSTM4Q03013 218 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 KLF10Q13118 480 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 PWP1Q13610 501 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 C1DQ13901 141 aaKnown RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 MINDY4Q4G0A6 757 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 PLEKHS1Q5SXH7 462 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 OTUD3Q5T2D3 398 aaPredicted RBP11.04□□□□□ -0.64
POLR1B-202ENST00000333990 SLC30A9Q6PML9 568 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 NATD1Q8N6N6 113 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 ZFYVE19Q96K21 471 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 MCMBPQ9BTE3 642 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 ERVK-6Q9BXR3 956 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 KATNBL1Q9H079 304 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
POLR1B-202ENST00000333990 RREB1Q92766 1687 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SLC18A1P54219 525 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TMEM115Q12893 351 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 DGKKQ5KSL6 1271 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SLC9B2Q86UD5 537 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TERB1Q8NA31 727 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 GLIS1Q8NBF1 620 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 OR4A15Q8NGL6 344 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 DENND1AQ8TEH3 1009 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 FOXJ1Q92949 421 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 VMP1Q96GC9 406 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 WDR92Q96MX6 357 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 RANBP9Q96S59 729 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 POLR1BQ9H9Y6 1135 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 DOCK2Q92608 1830 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 A0A1W2PP55 124 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TCRBV21S2A2A0A5A6 115 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SAC3D1A6NKF1 404 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 B4DGG1 531 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 VEGFDO43915 354 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 PAK4O96013 591 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 OAS1P00973 400 aaKnown RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 IMPDH2P12268 514 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SRSF11Q05519 484 aaKnown RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SLC34A1Q06495 639 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 ZNF460Q14592 562 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 NCF4Q15080 339 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TOMM20Q15388 145 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 RAB41Q5JT25 222 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 CAMKVQ8NCB2 501 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 MAGEL2Q9UJ55 1249 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 GSNP06396 782 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 POLR2JP52435 117 aaKnown RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TNK2Q07912 1038 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SEMA3AQ14563 771 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 CLDN19Q8N6F1 224 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 CNTD1Q8N815 330 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 FAM3CQ92520 227 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 FGF13Q92913 245 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 DERL2Q9GZP9 239 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 EPS8L2Q9H6S3 715 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 SPATA6Q9NWH7 488 aaPredicted RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 TBX21Q9UL17 535 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
POLR1B-202ENST00000333990 MYH7BA7E2Y1 1941 aa11.03□□□□□ -0.64
POLR1B-202ENST00000333990 H3BQ06 376 aaPredicted RBP11.02□□□□□ -0.64
POLR1B-202ENST00000333990 ABLIM1O14639 778 aa11.02□□□□□ -0.64
POLR1B-202ENST00000333990 B3GALT2O43825 422 aa11.02□□□□□ -0.64
POLR1B-202ENST00000333990 SERPINB1P30740 379 aa11.02□□□□□ -0.64
POLR1B-202ENST00000333990 DUSP3P51452 185 aaPredicted RBP11.02□□□□□ -0.64
POLR1B-202ENST00000333990 PRR5P85299 388 aa11.02□□□□□ -0.64
POLR1B-202ENST00000333990 SLC25A3Q00325 362 aa11.02□□□□□ -0.64
POLR1B-202ENST00000333990 NFATC2Q13469 925 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms