RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 PIM3Q86V86 326 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 IGDCC3Q8IVU1 814 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 KRT222Q8N1A0 295 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 C2CD4AQ8NCU7 369 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 LKAAEAR1Q8TD35 194 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SKA2Q8WVK7 121 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 IFT81Q8WYA0 676 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CDKL2Q92772 493 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 WDR83Q9BRX9 315 aaKnown RBP10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 STRADBQ9C0K7 418 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 OR52A5Q9H2C5 316 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NSMCE4AQ9NXX6 385 aa10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZNF624Q9P2J8 865 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ATXN7L1Q9ULK2 861 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 A0A1W2PQM1 296 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SLC5A10A0PJK1 596 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TMX2-CTNND1H3BSU7 103 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NIPSNAP2O75323 286 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 VPS26AO75436 327 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 UBXN7O94888 489 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 S1PR4O95977 384 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 RPN2P04844 631 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 GSTA2P09210 222 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 AOAHP28039 575 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CCR7P32248 378 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 MGAT5Q09328 741 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TARDBPQ13148 414 aaKnown RBP eCLIP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 GPR18Q14330 331 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 FRG1Q14331 258 aaKnown RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 PLEKHS1Q5SXH7 462 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 PHF19Q5T6S3 580 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CAPRIN2Q6IMN6 1127 aaKnown RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 UGT3A1Q6NUS8 523 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 KLHL35Q6PF15 583 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZDHHC24Q6UX98 284 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NAPRTQ6XQN6 538 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 GALNT7Q86SF2 657 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CNTN4Q8IWV2 1026 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 UNC5BQ8IZJ1 945 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CACTIN-AS1Q8N1I8 211 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 DCBLD1Q8N8Z6 715 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SEC14L1Q92503 715 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NCSTNQ92542 709 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TFGQ92734 400 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 GRAMD1AQ96CP6 724 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 FOPNLQ96NB1 174 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 BIRC8Q96P09 236 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 FERD3LQ96RJ6 166 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 FMO2Q99518 471 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TBC1D10AQ9BXI6 508 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 MVB12BQ9H7P6 319 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SLC40A1Q9NP59 571 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 AKAP7Q9P0M2 348 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TXNDC16Q9P2K2 825 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 DMGDHQ9UI17 866 aaKnown RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CORO1CQ9ULV4 474 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ASF1AQ9Y294 204 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 BPTFQ12830 3046 aa10.74□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ANKRD12Q6UB98 2062 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 B4GAT1O43505 415 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SPAG6O75602 509 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 PROS1P07225 676 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 F7P08709 466 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 RHOXF2BP0C7M4 288 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TYRP1P17643 537 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 PDHA2P29803 388 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 STX2P32856 288 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 MAGEA4P43358 317 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 LEPRP48357 1165 aaKnown RBP10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CBLBQ13191 982 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CUL1Q13616 776 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TRADDQ15628 312 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ISXQ2M1V0 245 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZNF658BQ4V348 819 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZNF789Q5FWF6 425 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TEX35Q5T0J7 233 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NKAIN2Q5VXU1 208 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 TRMT10BQ6PF06 316 aaKnown RBP10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CNSTQ6PJW8 725 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 CCNI2Q6ZMN8 369 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SLC26A11Q86WA9 606 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 OOSP2Q86WS3 158 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 IFT20Q8IY31 132 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 SLC22A15Q8IZD6 547 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ZBTB2Q8N680 514 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 KCNJ9Q92806 393 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 FAM136AQ96C01 138 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 NXPE2Q96DL1 559 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 C9orf72Q96LT7 481 aa10.73□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 RHOXF2Q9BQY4 288 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms