RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 C14orf119Q9NWQ9 140 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PDP1Q9P0J1 537 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PCDHB14Q9Y5E9 798 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 KERAO60938 352 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 UPK1BO75841 260 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 B3GAT3O94766 335 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GABARAPO95166 117 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 MTHFD2P13995 350 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PFKLP17858 780 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GGT1P19440 569 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PCSK1P29120 753 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GRK3P35626 688 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 HMGCS1Q01581 520 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PWP1Q13610 501 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 RFX4Q33E94 735 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GTDC1Q4AE62 458 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 C14orf80Q86SX3 495 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 DCP2Q8IU60 420 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 APOBEC3FQ8IUX4 373 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TTC29Q8NA56 475 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TSPEARQ8WU66 669 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZBED3Q96IU2 234 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 B3GALT6Q96L58 329 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF599Q96NL3 588 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 MBOAT4Q96T53 435 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SH3GL1Q99961 368 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PSD2Q9BQI7 771 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 RERGLQ9H628 205 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 MRM3Q9HC36 420 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 CPNE5Q9HCH3 593 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TXNRD2Q9NNW7 524 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZIM2Q9NZV7 527 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SAMHD1Q9Y3Z3 626 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 E9PAM4 449 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 CCRL2O00421 344 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 AXIN1O15169 862 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 WARSP23381 471 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 AZGP1P25311 298 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 LHX1P48742 406 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ISL1P61371 349 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 KCNC4Q03721 635 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZFAND4Q86XD8 727 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SIDT2Q8NBJ9 832 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SKA2Q8WVK7 121 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 RDH12Q96NR8 316 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 RPRD1AQ96P16 312 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 CYP2S1Q96SQ9 504 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 KRT84Q9NSB2 600 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 HPRP00739 348 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 DNTTP04053 509 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ADRA1AP35348 466 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CSRP3P50461 194 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 OR2B6P58173 313 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 IL2P60568 153 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SPATS1Q496A3 300 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SPANXN4Q5MJ08 99 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CACHD1Q5VU97 1274 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 GALNT10Q86SR1 603 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 PHYKPLQ8IUZ5 450 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 UTP15Q8TED0 518 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 VMP1Q96GC9 406 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 REXO5Q96IC2 774 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF641Q96N77 438 aaPredicted RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 WBP11Q9Y2W2 641 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 TESMINQ9Y4I5 508 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 LOC110117498-PIK3R3F6TDL0 507 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ARPP19P56211 112 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SDHAF4Q5VUM1 108 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 KIAA0319Q5VV43 1072 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CIR1Q86X95 450 aaPredicted RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 STX19Q8N4C7 294 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms