RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 MLXIPLQ9NP71 852 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 FGF21Q9NSA1 209 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 KLHL8Q9P2G9 620 aaPredicted RBP10.06□□□□□ -0.8
VPS50-201ENST00000251739 SLC24A2Q9UI40 661 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 TLK1Q9UKI8 766 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 TRHDEQ9UKU6 1024 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 MAN2B2Q9Y2E5 1009 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 ALG6Q9Y672 507 aa10.06□□□□□ -0.8
VPS50-201ENST00000251739 POLEQ07864 2286 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 CNTRLQ7Z7A1 2325 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PIPSLA2A3N6 862 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 CDC14CA4D256 554 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 HACD1B0YJ81 288 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 F5H423 210 aaPredicted RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 DNAJB5O75953 348 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 LCA5LO95447 670 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PRAMEF1O95521 474 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 MSL3P1P0C860 447 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 TNNT1P13805 278 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PTPN4P29074 926 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 KPNA2P52292 529 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 TUBB4BP68371 445 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 HSD11B2P80365 405 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 XIAPP98170 497 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 ACY1Q03154 408 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 GPS2Q13227 327 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 XRCC4Q13426 336 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 IL10RAQ13651 578 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 TUBB2AQ13885 445 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 LLGL1Q15334 1064 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 UGT8Q16880 541 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 LONRF2Q1L5Z9 754 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 DNTTIP2Q5QJE6 756 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 FNBP1LQ5T0N5 605 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 CPZQ66K79 652 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 KAZNQ674X7 775 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 RANBP10Q6VN20 620 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 ASB18Q6ZVZ8 466 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 SYVN1Q86TM6 617 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 KLHDC8BQ8IXV7 354 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 FAM26EQ8N5C1 309 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 OR2L2Q8NH16 312 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 OR8K5Q8NH50 307 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 ADAMTS17Q8TE56 1095 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 NAT14Q8WUY8 206 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 SEC14L1Q92503 715 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 P3H4Q92791 437 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 LRFN5Q96NI6 719 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 INSM2Q96T92 566 aaPredicted RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 C19orf43Q9BQ61 176 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 TUBB2BQ9BVA1 445 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 WWP1Q9H0M0 922 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 IMP3Q9NV31 184 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 POMT2Q9UKY4 750 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 ACSL5Q9ULC5 683 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 ARL5AQ9Y689 179 aa10.05□□□□□ -0.8
VPS50-201ENST00000251739 CFAP20Q9Y6A4 193 aaKnown RBP10.05□□□□□ -0.8
VPS50-201ENST00000251739 IGLV3-16A0A075B6K0 115 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 STX7O15400 261 aaKnown RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 LILRA1O75019 489 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 KATNA1O75449 491 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 CEACAM4O75871 244 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 ZBTB11O95625 1053 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 AGTP01019 485 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 APOC2P02655 101 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 NTRK1P04629 796 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 PYGMP11217 842 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 GP1BBP13224 206 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 LPOP22079 712 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 AKT1P31749 480 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 RORAP35398 523 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 PRLHRP49683 370 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 ZNF140P52738 457 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 RPS18P62269 152 aaKnown RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 PLCL1Q15111 1095 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 TAF1AQ15573 450 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 GPR19Q15760 415 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 ODF2Q5BJF6 829 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 ZNF789Q5FWF6 425 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 IZUMO3Q5VZ72 239 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 FAM199XQ6PEV8 388 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 PID1Q7Z2X4 250 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 OOSP2Q86WS3 158 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 LILRA3Q8N6C8 439 aaPredicted RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 OR4K2Q8NGD2 314 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms