RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ADAMTS3O15072 1205 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 CHRNGP07510 517 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 HAPLN1P10915 354 aaPredicted RBP22.82■■□□□ 1.24
TARBP1-201ENST00000040877 HERVK_113P63132 956 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 RALGDSQ12967 914 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 ITGADQ13349 1161 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 HID1Q8IV36 788 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 ZNF461Q8TAF7 563 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 C5orf34Q96MH7 638 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 ERVK-6Q9BXR3 956 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 CCSER2Q9H7U1 834 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 USP29Q9HBJ7 922 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 MAP4K5Q9Y4K4 846 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 LIN7AO14910 233 aaPredicted RBP22.82■■□□□ 1.24
TARBP1-201ENST00000040877 UBXN7O94888 489 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 IMPDH1P20839 514 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 CHRNA4P43681 627 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 DCST1Q5T197 706 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 FAM47BQ8NA70 645 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 CDKN2AIPNLQ96HQ2 116 aa22.82■■□□□ 1.24
TARBP1-201ENST00000040877 ZNF487B1APH4 448 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 ZSWIM7Q19AV6 140 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 UBASH3BQ8TF42 649 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 GKN1Q9NS71 199 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 RAB26Q9ULW5 256 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 HS3ST4Q9Y661 456 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 ABLIM1O14639 778 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SNPHO15079 494 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 B3GALT2O43825 422 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 MATN4O95460 622 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 DBTP11182 482 aaKnown RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 RPL26P61254 145 aaKnown RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SLC10A7Q0GE19 358 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 MED22Q15528 200 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 VWA5B1Q5TIE3 1220 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 THAP5Q7Z6K1 395 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 RANBP3LQ86VV4 465 aaPredicted RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SVOPLQ8N434 492 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 FITM2Q8N6M3 262 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 PNPT1Q8TCS8 783 aaKnown RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SLC13A3Q8WWT9 602 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 CENPNQ96H22 339 aaPredicted RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 LDOC1O95751 146 aaPredicted RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SAGP10523 405 aaPredicted RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 CD247P20963 164 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 ALAS2P22557 587 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SLC35G1Q2M3R5 365 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 SLC9A4Q6AI14 798 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 ZDHHC24Q6UX98 284 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 THUMPD1Q9NXG2 353 aaKnown RBP22.81■■□□□ 1.24
TARBP1-201ENST00000040877 GALNT8Q9NY28 637 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 XKRYO14609 159 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 ZDHHC18Q9NUE0 388 aa22.81■■□□□ 1.24
TARBP1-201ENST00000040877 HAT1O14929 419 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 FFAR2O15552 330 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 CBSLP0DN79 551 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 CBSP35520 551 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 AVPR1BP47901 424 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 HM13Q8TCT9 377 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 SH3GLB1Q9Y371 365 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 EDDM13A0A1B0GTR0 161 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 RB1P06400 928 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 RGS21Q2M5E4 152 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 JAZF1Q86VZ6 243 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 IL1RAPQ9NPH3 570 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 SMPD3Q9NY59 655 aaPredicted RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 COL1A1P02452 1464 aaPredicted RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 PPEF2O14830 753 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 SRPRAP08240 638 aaKnown RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 RHAGQ02094 409 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 CYP2U1Q7Z449 544 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 DCBLD1Q8N8Z6 715 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 MRPS30Q9NP92 439 aaKnown RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 A0A1W2PQ45 241 aaPredicted RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 A0A1W2PQY0 241 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 UBE2QL1A1L167 161 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 FAM234BA2RU67 622 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 CCND3P30281 292 aaPredicted RBP22.8■■□□□ 1.24
TARBP1-201ENST00000040877 SLC11A1P49279 550 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 SLC18A1P54219 525 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 ERVK-8P63133 956 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 GALNT2Q10471 571 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 OR13C4Q8NGS5 318 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 U3KQV3 271 aa22.8■■□□□ 1.24
TARBP1-201ENST00000040877 PGRMC2O15173 223 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 MINDY4Q4G0A6 757 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 B3GALT6Q96L58 329 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 NPY6RQ99463 290 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 TDP1Q9NUW8 608 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 RAPGEFL1Q9UHV5 662 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 FBXW2Q9UKT8 454 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 PRORSD1PA6NEY8 169 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 PDPK1O15530 556 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 THRBP10828 461 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 CYP4B1P13584 511 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 ALDH4A1P30038 563 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 VIPR1P32241 457 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 JAG1P78504 1218 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 GHRHRQ02643 423 aa22.79■■□□□ 1.24
TARBP1-201ENST00000040877 MBOAT1Q6ZNC8 495 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms