RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PTGR2Q8N8N7 351 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TP53I13Q8NBR0 393 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 DENND6BQ8NEG7 585 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 OR2T34Q8NGX1 318 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 C10orf82Q8WW14 230 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 HMGB4Q8WW32 186 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ELMO1Q92556 727 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 GLMNQ92990 594 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 EXT2Q93063 718 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TMEM159Q96B96 161 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 FAR2Q96K12 515 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LINC00615Q96LM1 132 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LENG8Q96PV6 779 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TMEM237Q96Q45 408 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SORT1Q99523 831 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TEX101Q9BY14 249 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SLC17A9Q9BYT1 436 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TRIM54Q9BYV2 358 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 C20orf27Q9GZN8 174 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 BTBD1Q9H0C5 482 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 WWP1Q9H0M0 922 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SLC6A17Q9H1V8 727 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 OR2AG1Q9H205 316 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 WDR26Q9H7D7 661 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LMAN1LQ9HAT1 526 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 RDH14Q9HBH5 336 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SGK2Q9HBY8 427 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LTB4R2Q9NPC1 389 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ITM2CQ9NQX7 267 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 PHPT1Q9NRX4 125 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 USP36Q9P275 1121 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 VTI1BQ9UEU0 232 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 HAO1Q9UJM8 370 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 DNAJC16Q9Y2G8 782 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 RAP2CQ9Y3L5 183 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 DNMT3AQ9Y6K1 912 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SCN8AQ9UQD0 1980 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PRR23AA6NEV1 266 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 NEMP2A6NFY4 417 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ERICH4A6NGS2 130 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 FFAR2O15552 330 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 GPC4O75487 556 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 LYPLA1O75608 230 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 KIAA0754O94854 1291 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SUPT7LO94864 414 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PAK4O96013 591 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 IGLV3-19P01714 112 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 HOXC4P09017 264 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 KITP10721 976 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 MYCLP1P12525 358 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ALOX15P16050 662 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ZNF8P17098 575 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 VCLP18206 1134 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 CYP2A7P20853 494 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 EEF1DP29692 281 aaKnown RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 OXTRP30559 389 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TPMTP51580 245 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 CTSCP53634 463 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 CDKL1Q00532 357 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 FGL2Q14314 439 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 INPP5AQ14642 412 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 UBXN2BQ14CS0 331 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SETDB1Q15047 1291 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 IRF4Q15306 451 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PPP1R3AQ16821 1122 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ARL13AQ5H913 290 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ZNF648Q5T619 568 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ANKS6Q68DC2 871 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SULT1C3Q6IMI6 304 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 METTL2BQ6P1Q9 378 aaKnown RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TTC23LQ6PF05 361 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 Q6ZS52 159 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 FAM124AQ86V42 546 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 LRRTM4Q86VH4 590 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TRAPPC5Q8IUR0 188 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PELI3Q8N2H9 469 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PGBD3Q8N328 593 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TCAIMQ8N3R3 496 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 GBP7Q8N8V2 638 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PLA2G15Q8NCC3 412 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PDPRQ8NCN5 879 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 RFWD2Q8NHY2 731 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 HM13Q8TCT9 377 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 NAT14Q8WUY8 206 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SKA2Q8WVK7 121 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 STON2Q8WXE9 905 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 THOC1Q96FV9 657 aaKnown RBP7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 FOPNLQ96NB1 174 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 C1QTNF3Q9BXJ4 246 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 SLC12A9Q9BXP2 914 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 OSBPL6Q9BZF3 934 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 GSTO2Q9H4Y5 243 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ZNF395Q9H8N7 513 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms