RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 BEND5Q7L4P6 421 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 LDB1Q86U70 411 aaPredicted RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 PELI3Q8N2H9 469 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 BPIFB6Q8NFQ5 453 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 DLG3Q92796 817 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 SNAPC3Q92966 411 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 AP5M1Q9H0R1 490 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 CATSPERBQ9H7T0 1116 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 CPA4Q9UI42 421 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 ZNF175Q9Y473 711 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 A8MT66 165 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 H0Y858 1186 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 TSPAN8P19075 237 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 FMO4P31512 558 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 MAGEA11P43364 429 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 SOX9P48436 509 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 CPT1AP50416 773 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 MRPS6P82932 125 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 CD83Q01151 205 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 FASTKQ14296 549 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 FAM110CQ1W6H9 321 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 FAM83EQ2M2I3 478 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 TECRLQ5HYJ1 363 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 CUZD1Q86UP6 607 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 LYSMD2Q8IV50 215 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 LGI2Q8N0V4 545 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 IL17RDQ8NFM7 739 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 OR10T2Q8NGX3 314 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 PIP5K1AQ99755 562 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 MRM3Q9HC36 420 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 CCDC167Q9P0B6 97 aa12.29□□□□□ -0.44
LITAF-221ENST00000622633 WBP11Q9Y2W2 641 aaKnown RBP12.29□□□□□ -0.44
LITAF-221ENST00000622633 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CCL22O00626 93 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 UBDO15205 165 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 POMCP01189 267 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CLEC2LP0C7M8 214 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 ST13P50502 369 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 MFSD13AQ14CX5 517 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 MANEALQ5VSG8 457 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CHSY3Q70JA7 882 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 RNF170Q96K19 258 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 TTYH2Q9BSA4 534 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CD93Q9NPY3 652 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 EIF3KQ9UBQ5 218 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 IPO11Q9UI26 975 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 SNX7Q9UNH6 387 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 ADAM11O75078 769 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 BCAS1O75363 584 aaPredicted RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 DNAJB5O75953 348 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 IPO13O94829 963 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 ODC1P11926 461 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CCR1P32246 355 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 KPNA2P52292 529 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 MAXP61244 160 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 OLR1P78380 273 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 ITKQ08881 620 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 TBRG1Q3YBR2 411 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 PAGE2BQ5JRK9 111 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 COLGALT2Q8IYK4 626 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 SCML4Q8N228 414 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 LRTOMTQ8WZ04 291 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 DMRTB1Q96MA1 342 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
LITAF-221ENST00000622633 ACBD6Q9BR61 282 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 FBXO8Q9NRD0 319 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 PCOLCE2Q9UKZ9 415 aa12.28□□□□□ -0.44
LITAF-221ENST00000622633 ISPDA4D126 451 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 E9PAM4 449 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 FGF10O15520 208 aaPredicted RBP12.27□□□□□ -0.45
LITAF-221ENST00000622633 SULT1B1O43704 296 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 PDGFAP04085 211 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 LTA4HP09960 611 aaKnown RBP12.27□□□□□ -0.45
LITAF-221ENST00000622633 IMPDH1P20839 514 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 HOXC13P31276 330 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 KCNC1P48547 511 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 STX5Q13190 355 aa12.27□□□□□ -0.45
LITAF-221ENST00000622633 ACAP2Q15057 778 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms