RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF556Q9HAH1 456 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 BFARQ9NZS9 450 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 AP4E1Q9UPM8 1137 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF831Q5JPB2 1677 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 IGLV3-22A0A075B6J6 115 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C4BPAP04003 597 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 PTX3P26022 381 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 DDX6P26196 483 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-218ENST00000566029 EFNA5P52803 228 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TIPARPQ7Z3E1 657 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 CBWD2Q8IUF1 395 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PHC2Q8IXK0 858 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FNDC5Q8NAU1 212 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GTPBP2Q9BX10 602 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 HDHD5Q9BXW7 423 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CYP4F12Q9HCS2 524 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SNX15Q9NRS6 342 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DOT1LQ8TEK3 1739 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 H3BM21 787 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 YKT6O15498 198 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PRKD3O94806 890 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 OR5F1O95221 314 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 OPN1LWP04000 364 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SAGP10523 405 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC2A4P14672 509 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CSF2RAP15509 400 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TUBG1P23258 451 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MAPK8P45983 427 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DEFA1P59665 94 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DEFA3P59666 94 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TOR2AQ5JU69 321 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C15orf39Q6ZRI6 1047 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FAM92BQ6ZTR7 304 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 APOBEC3FQ8IUX4 373 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 FAM178BQ8IXR5 827 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ANKRD52Q8NB46 1076 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FAM83FQ8NEG4 500 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 TRMT61AQ96FX7 289 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SIK2Q9H0K1 926 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZBTB26Q9HCK0 441 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DNAJC11Q9NVH1 559 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GFOD1Q9NXC2 390 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C16orf96A6NNT2 1141 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CST8O60676 142 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 AP2A2O94973 939 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NTSR2O95665 410 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MOCS2O96007 188 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 GPIP06744 558 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CD9P21926 228 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FASP25445 335 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 VBP1P61758 197 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ROR1Q01973 937 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MAP2K5Q13163 448 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 BATFQ16520 125 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MEP1AQ16819 746 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 AP5B1Q2VPB7 878 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RBM48Q5RL73 367 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 KDM4DQ6B0I6 523 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TMEM65Q6PI78 240 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CDKL3Q8IVW4 592 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 LILRB2Q8N423 598 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TMEM151AQ8N4L1 468 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CPA6Q8N4T0 437 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PQLC3Q8N755 202 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF614Q8N883 585 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 POC5Q8NA72 575 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NAXEQ8NCW5 288 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NXNL1Q96CM4 212 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CRELD1Q96HD1 420 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SMOC2Q9H3U7 446 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 EPS8L2Q9H6S3 715 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CHST12Q9NRB3 414 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PARPBPQ9NWS1 579 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TMEM181Q9P2C4 612 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NEMP2A6NFY4 417 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC15A5A6NIM6 579 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CENPXA8MT69 81 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PSMD10O75832 226 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC22A5O76082 557 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CHRNGP07510 517 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF250P15622 560 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HMGCLP35914 325 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CHRNDQ07001 517 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GUK1Q16774 197 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TRMT10BQ6PF06 316 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 R3HCC1LQ7Z5L2 792 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 AADATQ8N5Z0 425 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 LURAP1Q96LR2 239 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 UROC1Q96N76 676 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 AKAP7Q9P0M2 348 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 OR2A25A4D2G3 310 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SAGE2PA6NJ88 616 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ERVV-1B6SEH8 477 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KPNA3O00505 521 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 PITPNM1O00562 1244 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SCAMP2O15127 329 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 MAPTP10636 758 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 RPL4P36578 427 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ETV6P41212 452 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GYG1P46976 350 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms