RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PLSCR3Q9NRY6 295 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 AGPAT4Q9NRZ5 378 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KRT84Q9NSB2 600 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ZNF275Q9NSD4 429 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 THUMPD1Q9NXG2 353 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SPHK1Q9NYA1 384 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 RDH8Q9NYR8 311 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USE1Q9NZ43 259 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 CD274Q9NZQ7 290 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ERVK-18Q9QC07 812 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 UXTQ9UBK9 157 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SLC6A14Q9UN76 642 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PDE10AQ9Y233 779 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TPRKBQ9Y3C4 175 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TBX22Q9Y458 520 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 HSPB11Q9Y547 144 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PSAT1Q9Y617 370 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PIK3C2BO00750 1634 aa6.21□□□□□ -1.41
PTPN9-204ENST00000564970 TMEM2Q9UHN6 1383 aa6.21□□□□□ -1.41
PTPN9-204ENST00000564970 PLCH1Q4KWH8 1693 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 A0A1B0GVI7 797 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 A0A1W2PPM1 405 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RPS10-NUDT3A0A1W2PQS6 291 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FAM205CA6NFA0 338 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CA12O43570 354 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 LRCH4O75427 683 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RPS6KA4O75676 772 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 DDAH1O94760 285 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 DDNO94850 711 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 AMHP03971 560 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 GLAP06280 429 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FCER2P06734 321 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CLEC2LP0C7M8 214 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF806P0C7X5 589 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SLC2A1P11166 492 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 JUPP14923 745 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF8P17098 575 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 TNNI1P19237 187 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MYL9P24844 172 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 HTR1BP28222 390 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MAT2AP31153 395 aaKnown RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 EPHX2P34913 555 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 GPC1P35052 558 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PTPN7P35236 360 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SPRP35270 261 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ACTR1BP42025 376 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 IDH3AP50213 366 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ATXN3P54252 364 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CDH13P55290 713 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 KCNK10P57789 538 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PSMC6P62333 389 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SKP1P63208 163 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NOMO3P69849 1222 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 GCNT1Q02742 428 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PPP3CAQ08209 521 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 TDGQ13569 410 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 VEPH1Q14D04 833 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NOMO1Q15155 1222 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 TEAD4Q15561 434 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SMTNL2Q2TAL5 461 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 TUSC1Q2TAM9 212 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 UAP1L1Q3KQV9 507 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 KLHL26Q53HC5 615 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CYBRD1Q53TN4 286 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 DCAF17Q5H9S7 520 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MTX3Q5HYI7 312 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RIPPLY2Q5TAB7 128 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FAM45BPQ6NSW5 357 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MZT2BQ6NZ67 158 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PKN3Q6P5Z2 889 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RSBN1LQ6PCB5 846 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SEZ6L2Q6UXD5 910 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 USP53Q70EK8 1073 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CYS1Q717R9 158 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 BRINP3Q76B58 766 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 EIF3MQ7L2H7 374 aaKnown RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CCDC190Q86UF4 302 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SPNS2Q8IVW8 549 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 OR8H3Q8N146 312 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SVOPLQ8N434 492 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CBR4Q8N4T8 237 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 C12orf45Q8N5I9 185 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ATPAF2Q8N5M1 289 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PPM1NQ8N819 430 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 WDSUB1Q8N9V3 476 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 KDF1Q8NAX2 398 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 AVL9Q8NBF6 648 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PAPD5Q8NDF8 572 aaKnown RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SETD9Q8NE22 299 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ZMIZ2Q8NF64 920 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 OR4M1Q8NGD0 313 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 OR6M1Q8NGM8 313 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FAM45AQ8TCE6 357 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SFT2D1Q8WV19 159 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SHC3Q92529 594 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms