RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 VPS35Q96QK1 796 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 MAK16Q9BXY0 300 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 NAT10Q9H0A0 1025 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 ACTR5Q9H9F9 607 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 UBP1Q9NZI7 540 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 CTTNBP2NLQ9P2B4 639 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 NFKBIL1Q9UBC1 381 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 GPN3Q9UHW5 284 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 ARHGAP10A1A4S6 786 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 LRRD1A4D1F6 860 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC9B1P1A6NJY1 282 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PEX12O00623 359 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 AURKAO14965 403 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PPP1R12AO14974 1030 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 LDB2O43679 373 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A9O60656 530 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 KCNJ13O60928 360 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 CEACAM4O75871 244 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 LCA5LO95447 670 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 NDST3O95803 873 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 MT-CYBP00156 380 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 RAB40ALP0C0E4 278 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A6P19224 532 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 AGXTP21549 392 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A1P22309 533 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A4P22310 534 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SPAM1P38567 509 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PREPP48147 710 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 ARSEP51690 589 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 IFI35P80217 286 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PPIDQ08752 370 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PLEKHN1Q494U1 663 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 LDLRAP1Q5SW96 308 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PLEKHS1Q5SXH7 462 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 VWA5B1Q5TIE3 1220 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 MLIPQ5VWP3 458 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 FAM83HQ6ZRV2 1179 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 B4GALNT4Q76KP1 1039 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 C11orf96Q7Z7L8 435 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC25A41Q8N5S1 370 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 CNTD1Q8N815 330 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 RASGEF1AQ8N9B8 481 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC38A9Q8NBW4 561 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 ADAMTS17Q8TE56 1095 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 MOCOSQ96EN8 888 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 IMP4Q96G21 291 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PPM1MQ96MI6 270 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 TRIB3Q96RU7 358 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SRPK1Q96SB4 655 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 DEF6Q9H4E7 631 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A7Q9HAW7 530 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A10Q9HAW8 530 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 UGT1A8Q9HAW9 530 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 IRAK4Q9NWZ3 460 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 B3GNT3Q9Y2A9 372 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 PKP3Q9Y446 797 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 SPO11Q9Y5K1 396 aa10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 COPG1Q9Y678 874 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-207ENST00000560492 A0A0A6YYK5 440 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 GLYATL1P3A0A0U1RQE8 302 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 APOL1O14791 398 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 GPR39O43194 453 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 BUD23O43709 281 aaKnown RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 SERPINC1P01008 464 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 CYP1A2P05177 515 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 POLBP06746 335 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 LMAN1P49257 510 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 KPNA2P52292 529 aaKnown RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 CTSCP53634 463 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 TAS2R40P59535 323 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 DYNLT1P63172 113 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 ADCY2Q08462 1091 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 ABRQ12979 859 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 NCF4Q15080 339 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 NOMO1Q15155 1222 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 LONRF2Q1L5Z9 754 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 RFX6Q8HWS3 928 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZBTB2Q8N680 514 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 PQLC3Q8N755 202 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 BEND7Q8N7W2 519 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 GLIS1Q8NBF1 620 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 OR4E2Q8NGC2 313 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 FAM71BQ8TC56 605 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 BLOC1S5Q8TDH9 187 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 TM9SF4Q92544 642 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 FER1L6-AS2Q96M78 137 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 RNF157Q96PX1 679 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 INSM2Q96T92 566 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 SMAD5Q99717 465 aaKnown RBP10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 KLHL25Q9H0H3 589 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC25A51Q9H1U9 297 aa10.21□□□□□ -0.77
CDC42BPB-207ENST00000560492 SRMSQ9H3Y6 488 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms