RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 POU4F1Q01851 419 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 HSPA14Q0VDF9 509 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 PDAP1Q13442 181 aaKnown RBP7.49□□□□□ -1.21
TDP1-214ENST00000556063 NFE2L1Q14494 772 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KRT33BQ14525 404 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 SLC29A2Q14542 456 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 TCEA2Q15560 299 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 UAP1Q16222 522 aaPredicted RBP7.49□□□□□ -1.21
TDP1-214ENST00000556063 DEFB133Q30KQ1 61 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ZNF789Q5FWF6 425 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CTSL3PQ5NE16 218 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 PLEKHS1Q5SXH7 462 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KCTD16Q68DU8 428 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 LRRC8EQ6NSJ5 796 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 OGFOD3Q6PK18 319 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ABRAXAS1Q6UWZ7 409 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 DBX2Q6ZNG2 339 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 MICALCLQ6ZW33 695 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KANSL1Q7Z3B3 1105 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CCDC91Q7Z6B0 441 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 NRROSQ86YC3 692 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 NAXDQ8IW45 347 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KRT222Q8N1A0 295 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ZBTB2Q8N680 514 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 EID2Q8N6I1 236 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ARL10Q8N8L6 244 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 FAM181AQ8N9Y4 354 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 MYRIPQ8NFW9 859 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 OR6C4Q8NGE1 309 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CCL4L1Q8NHW4 92 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 INPP5DQ92835 1189 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 NAT6Q93015 286 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 SH3KBP1Q96B97 665 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CXorf40BQ96DE9 158 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ELMO2Q96JJ3 720 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 FOPNLQ96NB1 174 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 RBBP8Q99708 897 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 SYTL2Q9HCH5 934 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 SMYD2Q9NRG4 433 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 LATS2Q9NRM7 1088 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 RXFP3Q9NSD7 469 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 GULP1Q9UBP9 304 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 FTSJ1Q9UET6 329 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 SLC23A2Q9UGH3 650 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 FETUBQ9UGM5 382 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
TDP1-214ENST00000556063 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 DHRS7Q9Y394 339 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 PLEKHM1Q9Y4G2 1056 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 HEBP2Q9Y5Z4 205 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 UNC13CQ8NB66 2214 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ASXL3Q9C0F0 2248 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC5A10A0PJK1 596 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 IQCF5A8MTL0 148 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CXorf49A8MYA2 514 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 B4DGG1 531 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CTIFO43310 598 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 GDF9O60383 454 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 LDOC1O95751 146 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 VIPP01282 170 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 RPN2P04844 631 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 CBSLP0DN79 551 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CD59P13987 128 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SAT1P21673 171 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 AOAHP28039 575 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 GABRB3P28472 473 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 ATP5DP30049 168 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CCR7P32248 378 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CBSP35520 551 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 HSD17B3P37058 310 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 LIMK2P53671 638 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 RP1P56715 2156 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 IFFO1Q0D2I5 559 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 USP10Q14694 798 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 NR0B2Q15466 257 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SEPT7Q16181 437 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 C14orf28Q4W4Y0 310 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 HECTD2Q5U5R9 776 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 TTC23LQ6PF05 361 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 IYDQ6PHW0 289 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 CROCCP2Q86T23 111 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC9B2Q86UD5 537 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 RBM12BQ8IXT5 1001 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 MREGQ8N565 214 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 PNPLA1Q8N8W4 532 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 UHMK1Q8TAS1 419 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 MAPK15Q8TD08 544 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 NAT14Q8WUY8 206 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SKA2Q8WVK7 121 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 ZFPM2Q8WW38 1151 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC44A1Q8WWI5 657 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 MRRFQ96E11 262 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 CCDC97Q96F63 343 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 ATXN7L3BQ96GX2 97 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms