RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 EPHB6O15197 1021 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ATMINO43313 823 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 KCNJ13O60928 360 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CNOT3O75175 753 aaKnown RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ALOX12BO75342 701 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 UMODP07911 640 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 MSL3P1P0C860 447 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ATXN8OSP0DMR3 200 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 MTHFD1P11586 935 aaKnown RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CD99P14209 185 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 POLR2CP19387 275 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CDH3P22223 829 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CA4P22748 312 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CES1P23141 567 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 DCDC1P59894 354 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TLE4Q04727 773 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 DMPKQ09013 629 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TMEM115Q12893 351 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 GALNT3Q14435 633 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 PRKD1Q15139 912 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ASIC2Q16515 512 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CAMK4Q16566 473 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 SMTNL2Q2TAL5 461 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 AGAP7PQ5VUJ5 663 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 RPUSD3Q6P087 351 aaKnown RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 MTFR2Q6P444 385 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 XKRXQ6PP77 449 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 GFRALQ6UXV0 394 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 FAM83HQ6ZRV2 1179 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 AMZ2Q86W34 360 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TRAPPC5Q8IUR0 188 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CATSPER1Q8NEC5 780 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 MAML1Q92585 1016 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 PTERQ96BW5 349 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ZNF653Q96CK0 615 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 AGAP4Q96P64 663 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CSPG4P5Q96PW8 444 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 C17orf62Q9BQA9 187 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TRIM7Q9C029 511 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 ZFYVE1Q9HBF4 777 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 MCCC2Q9HCC0 563 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 C1GALT1Q9NS00 363 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 IMP3Q9NV31 184 aaKnown RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 NFKBIL1Q9UBC1 381 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 GPN3Q9UHW5 284 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 SLC24A2Q9UI40 661 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 POMT2Q9UKY4 750 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 NEU2Q9Y3R4 380 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 TTLL3Q9Y4R7 772 aa8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CFAP20Q9Y6A4 193 aaKnown RBP8.65□□□□□ -1.02
UBE2N-203ENST00000549490 CNTRLQ7Z7A1 2325 aa8.65□□□□□ -1.03
UBE2N-203ENST00000549490 SEC16AO15027 2179 aa8.65□□□□□ -1.03
UBE2N-203ENST00000549490 ACANP16112 2415 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ZNF469Q96JG9 3925 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 TMEM191CA6NGB0 347 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 POP7O75817 140 aaKnown RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 RNF8O76064 485 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 HBQ1P09105 142 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 SPTBP11277 2137 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ST6GAL1P15907 406 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 IL1R2P27930 398 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 PBX1P40424 430 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ARL4AP40617 200 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 CA7P43166 264 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 LMAN1P49257 510 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ADORA2A-AS1P86434 159 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 XRCC4Q13426 336 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 SYCP1Q15431 976 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 CDSNQ15517 529 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 DPYSL2Q16555 572 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ZFYVE27Q5T4F4 411 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 C1orf189Q5VU69 101 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ACAD10Q6JQN1 1059 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 TMEM207Q6UWW9 146 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 TMC3Q7Z5M5 1100 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 LRRC49Q8IUZ0 686 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 OR1N1Q8NGS0 311 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 ZFPM2Q8WW38 1151 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 NR4A3Q92570 626 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 MAGEB10Q96LZ2 347 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 TAAR6Q96RI8 345 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 AGPAT1Q99943 283 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 EPS8L2Q9H6S3 715 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 SLC6A20Q9NP91 592 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 PARVAQ9NVD7 372 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 RBM22Q9NW64 420 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 IFT80Q9P2H3 777 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-203ENST00000549490 FBXL4Q9UKA2 621 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 SHOC2Q9UQ13 582 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 CDYLQ9Y232 598 aa8.64□□□□□ -1.03
UBE2N-203ENST00000549490 CCDC66A2RUB6 948 aa8.63□□□□□ -1.03
UBE2N-203ENST00000549490 MATN3O15232 486 aa8.63□□□□□ -1.03
UBE2N-203ENST00000549490 FAM155BO75949 473 aa8.63□□□□□ -1.03
UBE2N-203ENST00000549490 UNC5CO95185 931 aa8.63□□□□□ -1.03
UBE2N-203ENST00000549490 SLC4A1P02730 911 aa8.63□□□□□ -1.03
UBE2N-203ENST00000549490 HLA-DQB2P05538 268 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms