RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	AGRP	O00253	132 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	SLC35G4	P0C7Q5	338 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	ETS1	P14921	441 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	GRIA1	P42261	906 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	LEPR	P48357	1165 aa	Known RBP	13.09	□□□□□ -0.31
POLE-222	ENST00000545015	PPM1F	P49593	454 aa	Predicted RBP	13.09	□□□□□ -0.31
POLE-222	ENST00000545015	ATP1A2	P50993	1020 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	SNX1	Q13596	522 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	SEPT6	Q14141	434 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	MAP7	Q14244	749 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	SNAP47	Q5SQN1	464 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	TSTD2	Q5T7W7	516 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	LYPLAL1	Q5VWZ2	237 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	ARMC3	Q5W041	872 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	ANKS6	Q68DC2	871 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	PPP1R21	Q6ZMI0	780 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	RASGEF1C	Q8N431	466 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	UBXN4	Q92575	508 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	RMDN2	Q96LZ7	410 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	C12orf66	Q96MD2	445 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	WWP1	Q9H0M0	922 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	OR52A5	Q9H2C5	316 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	COG4	Q9H9E3	785 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	GRPEL1	Q9HAV7	217 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	PIH1D1	Q9NWS0	290 aa	Known RBP	13.09	□□□□□ -0.31
POLE-222	ENST00000545015	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.09	□□□□□ -0.31
POLE-222	ENST00000545015	PSMD13	Q9UNM6	376 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	JRKL	Q9Y4A0	524 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	OR5K3	A6NET4	321 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015		E7EVH7	732 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	POLR1C	O15160	346 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	APRT	P07741	180 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	ZSCAN5DP	P0CG00	497 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	PRSS56	P0CW18	603 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	NELFE	P18615	380 aa	Known RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	PBLD	P30039	288 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	CDK16	Q00536	496 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	IL11RA	Q14626	422 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	MANEA	Q5SRI9	462 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	AFTPH	Q6ULP2	937 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	CERS6	Q6ZMG9	384 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	TAS2R42	Q7RTR8	314 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	PRUNE1	Q86TP1	453 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	KMT5C	Q86Y97	462 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	CFAP206	Q8IYR0	622 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	TAB3	Q8N5C8	712 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	PRELID2	Q8N945	189 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	NAT14	Q8WUY8	206 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	SLC39A7	Q92504	469 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	SLC41A2	Q96JW4	573 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	TGM7	Q96PF1	710 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	TRIT1	Q9H3H1	467 aa	Known RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	IMP3	Q9NV31	184 aa	Known RBP	13.08	□□□□□ -0.32
POLE-222	ENST00000545015	KLHL3	Q9UH77	587 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	SLC24A2	Q9UI40	661 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	TCAF1	Q9Y4C2	921 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	COLEC10	Q9Y6Z7	277 aa		13.08	□□□□□ -0.32
POLE-222	ENST00000545015	SDK2	Q58EX2	2172 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CCDC162P	A2VCL2	907 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	LIN7A	O14910	233 aa	Predicted RBP	13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CEP104	O60308	925 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	RAD1	O60671	282 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	DLGAP3	O95886	979 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	ITGB2	P05107	769 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	FGF5	P12034	268 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	TPSB2	P20231	275 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	MAP4	P27816	1152 aa	Known RBP	13.07	□□□□□ -0.32
POLE-222	ENST00000545015	MAGEA6	P43360	314 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	LMAN1	P49257	510 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	PLOD1	Q02809	727 aa	Predicted RBP	13.07	□□□□□ -0.32
POLE-222	ENST00000545015	TPSAB1	Q15661	275 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CCDC38	Q502W7	563 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	PCID2	Q5JVF3	399 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CACHD1	Q5VU97	1274 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CYB5D1	Q6P9G0	228 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	ZNF534	Q76KX8	674 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CLDN19	Q8N6F1	224 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	ACVR1C	Q8NER5	493 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	HDAC10	Q969S8	669 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.07	□□□□□ -0.32	1e-6	■■■■□ 20.6
POLE-222	ENST00000545015	PBK	Q96KB5	322 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	ZNF778	Q96MU6	729 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	FCRL4	Q96PJ5	515 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	MVB12B	Q9H7P6	319 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	APMAP	Q9HDC9	416 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	SLC2A6	Q9UGQ3	507 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	PCDHGA4	Q9Y5G9	962 aa		13.07	□□□□□ -0.32
POLE-222	ENST00000545015	CFAP20	Q9Y6A4	193 aa	Known RBP	13.07	□□□□□ -0.32
POLE-222	ENST00000545015	TLCD2	A6NGC4	264 aa		13.06	□□□□□ -0.32
POLE-222	ENST00000545015	OR51F1	A6NGY5	319 aa		13.06	□□□□□ -0.32
POLE-222	ENST00000545015	MATN2	O00339	956 aa		13.06	□□□□□ -0.32
POLE-222	ENST00000545015	IFRD1	O00458	451 aa	Predicted RBP	13.06	□□□□□ -0.32
POLE-222	ENST00000545015	KIF1C	O43896	1103 aa	Known RBP	13.06	□□□□□ -0.32
POLE-222	ENST00000545015	STK17B	O94768	372 aa		13.06	□□□□□ -0.32
POLE-222	ENST00000545015	GOT2	P00505	430 aa	Known RBP	13.06	□□□□□ -0.32
POLE-222	ENST00000545015	FTH1	P02794	183 aa		13.06	□□□□□ -0.32
POLE-222	ENST00000545015	POLB	P06746	335 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms