RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KLHL14Q9P2G3 628 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 OARD1Q9Y530 152 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 SLC5A10A0PJK1 596 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 C10orf142B7Z368 130 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 MYCLP1P12525 358 aaPredicted RBP29.86■■■□□ 2.37
CCM2-219ENST00000544363 PBLDP30039 288 aaPredicted RBP29.86■■■□□ 2.37
CCM2-219ENST00000544363 OXTRP30559 389 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 HERVK_113P63132 956 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 ZNF678Q5SXM1 525 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 SPEM1Q8N4L4 309 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 ERVK-6Q9BXR3 956 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 CD274Q9NZQ7 290 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 FAM8A1Q9UBU6 413 aa29.86■■■□□ 2.37
CCM2-219ENST00000544363 GPR89AB7ZAQ6 455 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 GPR89BP0CG08 455 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 GJD3Q8N144 294 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 FOXJ1Q92949 421 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 GLMNQ92990 594 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 APOOQ9BUR5 198 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 UTP6Q9NYH9 597 aaKnown RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 GULP1Q9UBP9 304 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 DNAJC16Q9Y2G8 782 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 C17orf113A0A1B0GUU1 675 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 NCF1BA6NI72 391 aaPredicted RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 NCF1CA8MVU1 366 aaPredicted RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 SNX2O60749 519 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 POP7O75817 140 aaKnown RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 NCF1P14598 390 aaPredicted RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 ALDH18A1P54886 795 aaKnown RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 ARL13AQ5H913 290 aaPredicted RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 CRTC3Q6UUV7 619 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 SKA2Q8WVK7 121 aaPredicted RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 DLG3Q92796 817 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 TOE1Q96GM8 510 aaKnown RBP29.85■■■□□ 2.37
CCM2-219ENST00000544363 ASB2Q96Q27 587 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 MYOCQ99972 504 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 TRIOO75962 3097 aa29.85■■■□□ 2.37
CCM2-219ENST00000544363 COL6A3P12111 3177 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 STX16-NPEPL1H3BU86 382 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 STX16O14662 325 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 LIN7AO14910 233 aaPredicted RBP29.84■■■□□ 2.37
CCM2-219ENST00000544363 LATO43561 262 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 ZNF217O75362 1048 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 C8GP07360 202 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 CCR10P46092 362 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 RPS9P46781 194 aaKnown RBP29.84■■■□□ 2.37
CCM2-219ENST00000544363 UNC50Q53HI1 259 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 C11orf96Q7Z7L8 435 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 LSMEM2Q8N112 164 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 PIWIL2Q8TC59 973 aaKnown RBP29.84■■■□□ 2.37
CCM2-219ENST00000544363 ASB11Q8WXH4 323 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 RDH14Q9HBH5 336 aa29.84■■■□□ 2.37
CCM2-219ENST00000544363 WSB2Q9NYS7 404 aaPredicted RBP29.84■■■□□ 2.37
CCM2-219ENST00000544363 PCYT1BQ9Y5K3 369 aaPredicted RBP29.84■■■□□ 2.37
CCM2-219ENST00000544363 FFAR2O15552 330 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 SNUPNO95149 360 aaKnown RBP29.83■■■□□ 2.37
CCM2-219ENST00000544363 CHRNGP07510 517 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 HNRNPA2B1P22626 353 aaKnown RBP29.83■■■□□ 2.37
CCM2-219ENST00000544363 PHKG1Q16816 387 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 LRRTM4Q86VH4 590 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 LILRA3Q8N6C8 439 aaPredicted RBP29.83■■■□□ 2.37
CCM2-219ENST00000544363 ANKS4BQ8N8V4 417 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 OR2L2Q8NH16 312 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 RFWD2Q8NHY2 731 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 GSTO2Q9H4Y5 243 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 CD320Q9NPF0 282 aa29.83■■■□□ 2.37
CCM2-219ENST00000544363 DNMT3AQ9Y6K1 912 aaPredicted RBP29.83■■■□□ 2.37
CCM2-219ENST00000544363 MGAT4DA6NG13 374 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SUPT7LO94864 414 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SIX3O95343 332 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 APBB3O95704 486 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 KITP10721 976 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 CD6P30203 668 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 PREPP48147 710 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 CCR5P51681 352 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 ARHGAP8P85298 464 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 FRMD7Q6ZUT3 714 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 CFAP206Q8IYR0 622 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SLC22A15Q8IZD6 547 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 HM13Q8TCT9 377 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SLC12A9Q9BXP2 914 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 ILKAPQ9H0C8 392 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 C6orf106Q9H6K1 298 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 MARCOQ9UEW3 520 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 ARL2BPQ9Y2Y0 163 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 RAP2CQ9Y3L5 183 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SIT1Q9Y3P8 196 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 GFYI3L273 518 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 CACNB4O00305 520 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 FPGTO14772 594 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SLC16A5O15375 505 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 S100BP04271 92 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 HOXC4P09017 264 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 ENO2P09104 434 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 VCLP18206 1134 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SP140Q13342 867 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 SETDB1Q15047 1291 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 KIAA0895LQ68EN5 471 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 UBE2R2Q712K3 238 aaPredicted RBP29.82■■■□□ 2.36
CCM2-219ENST00000544363 ZNF781Q8N8C0 355 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms