RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HCAR3P49019 387 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PKNOX1P55347 436 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PPIDQ08752 370 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF276Q8N554 614 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 WDR36Q8NI36 951 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC22A8Q8TCC7 542 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC44A1Q8WWI5 657 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 GAL3ST4Q96RP7 486 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 BTBD10Q9BSF8 475 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CCDC28BQ9BUN5 200 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 RIBC2Q9H4K1 309 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SIX4Q9UIU6 781 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CDC14AQ9UNH5 594 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CRYBG1Q9Y4K1 1723 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM221BA6H8Z2 402 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM150CB9EJG8 249 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CRTAPO75718 401 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PDE5AO76074 875 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 UBTFL6P0CB48 400 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HLA-EP13747 358 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF30P17039 623 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 AGXTP21549 392 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SCTRP47872 440 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 LIMK2P53671 638 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SRSF11Q05519 484 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF155Q12901 538 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 KIAA0930Q6ICG6 404 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SULT1C3Q6IMI6 304 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CDC73Q6P1J9 531 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 DRICH1Q6PGQ1 229 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 KBTBD6Q86V97 674 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ARMC8Q8IUR7 673 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 NIPA2Q8N8Q9 360 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 OR4A15Q8NGL6 344 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PHF10Q8WUB8 498 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CKAP2Q8WWK9 683 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 NXNL1Q96CM4 212 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SIX2Q9NPC8 291 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 INTS10Q9NVR2 710 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ERVK-11Q9UQG0 969 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MFHAS1Q9Y4C4 1052 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 COPG1Q9Y678 874 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 GON4LQ3T8J9 2241 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TK2O00142 265 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 GABRDO14764 452 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RGS20O76081 388 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 KLF8O95600 359 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ADH1BP00325 375 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 NMBRP28336 390 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 VIPR1P32241 457 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 GJA5P36382 358 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ARL3P36405 182 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ACVRL1P37023 503 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 HSD17B2P37059 387 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 DEFA1P59665 94 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 DEFA3P59666 94 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 C2orf80Q0P641 193 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TIGD2Q4W5G0 525 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MS4A13Q5J8X5 152 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ZFP1Q6P2D0 407 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CRELD2Q6UXH1 353 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TBC1D21Q8IYX1 336 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 C5orf34Q96MH7 638 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PTPN18Q99952 460 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MRPS30Q9NP92 439 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PHF24Q9UPV7 400 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PHRF1Q9P1Y6 1649 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM20BO75063 409 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ANXA4P09525 319 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ALPIP09923 528 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PDK4Q16654 411 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 QPCTQ16769 361 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 VPS26BQ4G0F5 336 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PITRM1Q5JRX3 1037 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM154Q6P9G4 183 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC9A6Q92581 669 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 EXOSC8Q96B26 276 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RNFT2Q96EX2 444 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RMND5BQ96G75 393 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MS4A4AQ96JQ5 239 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CEP295NLQ96MC4 621 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CRB3Q9BUF7 120 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ADAMTS10Q9H324 1103 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 NOL11Q9H8H0 719 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SPHK2Q9NRA0 654 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SUSD2Q9UGT4 822 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 WBP11Q9Y2W2 641 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDHGA11Q9Y5H2 935 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 STYXL1Q9Y6J8 313 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 HEPACAM2A8MVW5 462 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MMP20O60882 483 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC22A3O75751 556 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TOP3BO95985 862 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 HLA-DQB2P05538 268 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 GCH1P30793 250 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CSTF2P33240 577 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms