RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 KAT8Q9H7Z6 458 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 IL1RL2Q9HB29 575 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 NMRAL1Q9HBL8 299 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ZBTB20Q9HC78 741 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SLC35C2Q9NQQ7 365 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 FAM118AQ9NWS6 357 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ANAPC2Q9UJX6 822 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 MAGED1Q9Y5V3 778 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SCN10AQ9Y5Y9 1956 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 CIB4A0PJX0 185 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF487B1APH4 448 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ACKR2O00590 384 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TFECO14948 347 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 LRCH4O75427 683 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 OR2B3O76000 313 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ACADMP11310 421 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 STMN1P16949 149 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ITGB6P18564 788 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 GZMKP49863 264 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SNRPFP62306 86 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 CRADDP78560 199 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TEKQ02763 1124 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TNK1Q13470 666 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SEMA5AQ13591 1074 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 CLCA4Q14CN2 919 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 PTPN20Q4JDL3 420 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ZBTB41Q5SVQ8 909 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SYT6Q5T7P8 510 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 STEAP4Q687X5 459 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 DENND5AQ6IQ26 1287 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 BRAT1Q6PJG6 821 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 CLEC4FQ8N1N0 589 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 KDM1BQ8NB78 822 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ST13P5Q8NFI4 369 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 OR9I1Q8NGQ6 314 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 OR10T2Q8NGX3 314 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TMEM40Q8WWA1 233 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SECISBP2Q96T21 854 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 WACQ9BTA9 647 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 IL22Q9GZX6 179 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 DHX35Q9H5Z1 703 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TMLHEQ9NVH6 421 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 ERVK-18Q9QC07 812 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 RIMKLBQ9ULI2 386 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 AUP1Q9Y679 476 aa9.35□□□□□ -0.91
CTNNA1-243ENST00000540387 TRIP12Q14669 1992 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 E5RI56 91 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 XPNPEP2O43895 674 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TBC1D4O60343 1298 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 RNGTTO60942 597 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PPM1BO75688 479 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 LRIG2O94898 1065 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PIGRP01833 764 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 C2P06681 752 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 HSD17B1P14061 328 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ACO1P21399 889 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PSMA2P25787 234 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 CD6P30203 668 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MAGEA11P43364 429 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MAGEA12P43365 314 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 RFX2P48378 723 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 RIN1Q13671 783 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 AMHR2Q16671 573 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 SEZ6Q53EL9 994 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 CASC4Q6P4E1 433 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 XKRXQ6PP77 449 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TMEM270Q6UE05 265 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PHC2Q8IXK0 858 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MICU2Q8IYU8 434 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PAPD5Q8NDF8 572 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 FANK1Q8TC84 345 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MCOLN3Q8TDD5 553 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 AURKBQ96GD4 344 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 OR2A14Q96R47 310 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TAS2R7Q9NYW3 318 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ABCD2Q9UBJ2 740 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 SLC23A1Q9UHI7 598 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 OGDHLQ9ULD0 1010 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 USP22Q9UPT9 525 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MTF2Q9Y483 593 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 A0A096LPK6 155 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 A0A0U1RQS6 177 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ATP6AP2A0A1C7CYW4 349 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TCRBV5S2A0A599 114 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 H0YC42 278 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 CALB1P05937 261 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PGRP06401 933 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ADORA3P0DMS8 318 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PIGAP37287 484 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms