RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NIPSNAP2O75323 286 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 UBXN7O94888 489 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 BPGMP07738 259 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 HNRNPA1P09651 372 aaKnown RBP eCLIP5.28□□□□□ -1.56
LRP6-203ENST00000538239 RYKP34925 604 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 STK19P49842 368 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 BTN3A2P78410 334 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 KPNB1Q14974 876 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 LARS2Q15031 903 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 RTP2Q5QGT7 225 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 GCNT6Q5T4J0 391 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ZNF648Q5T619 568 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 ARHGAP40Q5TG30 622 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CST9Q5W186 159 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 FSTL4Q6MZW2 842 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TTC27Q6P3X3 843 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ZNF730Q6ZMV8 503 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CYP2U1Q7Z449 544 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TMEM126BQ8IUX1 230 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 JPH3Q8WXH2 748 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 OVCA2Q8WZ82 227 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PRICKLE1Q96MT3 831 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 DCLRE1BQ9H816 532 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 NEUROD4Q9HD90 331 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CLN6Q9NWW5 311 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SIX4Q9UIU6 781 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 C9JVG2 144 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SOCS7O14512 581 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CYP4B1P13584 511 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MAGEA11P43364 429 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SMIM11AP58511 58 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DEFB103AP81534 67 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 LMAN2Q12907 356 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TCEAL5Q5H9L2 206 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 IL23RQ5VWK5 629 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DHDDSQ86SQ9 333 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TMEM110Q86TL2 294 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 EXOC3L1Q86VI1 746 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SVOPQ8N4V2 548 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 OR5M3Q8NGP4 307 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PYCR2Q96C36 320 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CDK15Q96Q40 435 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 REXO4Q9GZR2 422 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 RC3H2Q9HBD1 1191 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 COPG2Q9UBF2 871 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 LEFTY1O75610 366 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 EPCAMP16422 314 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CCKBRP32239 447 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ASMTP46597 345 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ATP12AP54707 1039 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 NTHL1P78549 312 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 IRF9Q00978 393 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SLC1A5Q15758 541 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SLC8B1Q6J4K2 584 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SPESP1Q6UW49 350 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 RPTNQ6XPR3 784 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 KRT77Q7Z794 578 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 C14orf80Q86SX3 495 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ANKRD46Q86W74 232 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TXNDC5Q8NBS9 432 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 ZNF671Q8TAW3 534 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 HCAR2Q8TDS4 363 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SMARCD2Q92925 531 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DGAT2Q96PD7 388 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MTERF1Q99551 399 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 NUSAP1Q9BXS6 441 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 TMEM27Q9HBJ8 222 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 IGSF9Q9P2J2 1179 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TAC3Q9UHF0 121 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SALL4Q9UJQ4 1053 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SAMHD1Q9Y3Z3 626 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 SQORQ9Y6N5 450 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PITPNM1O00562 1244 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 GNB5O14775 395 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 POP7O75817 140 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 METTL18O95568 372 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SAGP10523 405 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 OGNP20774 298 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 NDUFS1P28331 727 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ADSLP30566 484 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 LIMK2P53671 638 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CREB5Q02930 508 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DYNC1I2Q13409 638 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 OLIG2Q13516 323 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DDI2Q5TDH0 399 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 OLFML1Q6UWY5 402 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 C19orf18Q8NEA5 215 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 FCRL5Q96RD9 977 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CEP44Q9C0F1 390 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 FZD3Q9NPG1 666 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MTRRQ9UBK8 725 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ADGRE2Q9UHX3 823 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TPRKBQ9Y3C4 175 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 AK5Q9Y6K8 562 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CLCA3PQ9Y6N3 262 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms