RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 WWP1Q9H0M0 922 aa16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 OR52A5Q9H2C5 316 aa16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 SIDT1Q9NXL6 827 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 SLC2A6Q9UGQ3 507 aa16.81■□□□□ 0.28
SFSWAP-205ENST00000537164 TEX51A0A1B0GUA7 166 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 OR51F1A6NGY5 319 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 EFCAB7A8K855 629 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 K7ENP7 123 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 AGRPO00253 132 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CES2O00748 559 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CAPN5O15484 640 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SLC35G4P0C7Q5 338 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CD151P48509 253 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 NPY2RP49146 381 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 PPM1FP49593 454 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 BASP1P80723 227 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SNAP47Q5SQN1 464 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 ARMC3Q5W041 872 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 TTC27Q6P3X3 843 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 KLHL35Q6PF15 583 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 INO80CQ6PI98 192 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 AFTPHQ6ULP2 937 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CERS6Q6ZMG9 384 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 ZNF534Q76KX8 674 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 PRSS42Q7Z5A4 293 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SLC35F6Q8N357 371 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 OR4L1Q8NH43 312 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 ACTRT1Q8TDG2 376 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 PMEPA1Q969W9 287 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 RMDN2Q96LZ7 410 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 C12orf66Q96MD2 445 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CCNL2Q96S94 520 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 ZPBPQ9BS86 351 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SPRY4Q9C004 299 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 IL22Q9GZX6 179 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 ZNF768Q9H5H4 540 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 KIR3DX1Q9H7L2 352 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 COG4Q9H9E3 785 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 IMP3Q9NV31 184 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 SLC39A1Q9NY26 324 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 HEBP2Q9Y5Z4 205 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 B3GALT1Q9Y5Z6 326 aa16.8■□□□□ 0.28
SFSWAP-205ENST00000537164 CCDC78A2IDD5 438 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 A8MU76 341 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 STMND1H3BQB6 276 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 GOT2P00505 430 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 NDUFS1P28331 727 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 CXADRP78310 365 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 VAC14Q08AM6 782 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 DCAF12Q5T6F0 453 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 LRRC8BQ6P9F7 803 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 ZFAND4Q86XD8 727 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 FAM129CQ86XR2 697 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 PPHLN1Q8NEY8 458 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 KLHL6Q8WZ60 621 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■■■■ 62.8
SFSWAP-205ENST00000537164 ZDHHC12Q96GR4 267 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 MS4A14Q96JA4 679 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 OSBPL9Q96SU4 736 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 CPNE5Q9HCH3 593 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 CHRAC1Q9NRG0 131 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 TREX1Q9NSU2 369 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 SMARCAL1Q9NZC9 954 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 SLC24A2Q9UI40 661 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 NEU2Q9Y3R4 380 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 CFAP20Q9Y6A4 193 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 COLEC10Q9Y6Z7 277 aa16.79■□□□□ 0.28
SFSWAP-205ENST00000537164 PGRMC1O00264 195 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 LIN7AO14910 233 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 EFSO43281 561 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 POLBP06746 335 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 LEPRP48357 1165 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 KCNJ11Q14654 390 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 TGIF1Q15583 401 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 CEACAM20Q6UY09 585 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 LSM14AQ8ND56 463 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 COG1Q8WTW3 980 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 MAGOHBQ96A72 148 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 TGM7Q96PF1 710 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 UBL7Q96S82 380 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 TTC1Q99614 292 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 KIFC1Q9BW19 673 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 MRM3Q9HC36 420 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 BFARQ9NZS9 450 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 KLHL3Q9UH77 587 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 SNX12Q9UMY4 172 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 PRSS21Q9Y6M0 314 aa16.78■□□□□ 0.28
SFSWAP-205ENST00000537164 OR5K3A6NET4 321 aa16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 KIF5CO60282 957 aa16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 FTH1P02794 183 aa16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 PDHA2P29803 388 aa16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 PPARGP37231 505 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 COILP38432 576 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 SESN2P58004 480 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-205ENST00000537164 PRAMEP78395 509 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms