RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 C17orf113A0A1B0GUU1 675 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 EFCAB7A8K855 629 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 SGTAO43765 313 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 C9P02748 559 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 SLC35G4P0C7Q5 338 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 AMD1P17707 334 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 DR1Q01658 176 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 VAC14Q08AM6 782 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 NLRP9Q7RTR0 991 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 TAS2R42Q7RTR8 314 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 SERPINA9Q86WD7 417 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 BMPERQ8N8U9 685 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 UBXN4Q92575 508 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 TEFMQ96QE5 360 aaKnown RBP16.3■□□□□ 0.2
PKP3-209ENST00000533069 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
PKP3-209ENST00000533069 CCM2Q9BSQ5 444 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 EIF2B3Q9NR50 452 aaKnown RBP16.3■□□□□ 0.2
PKP3-209ENST00000533069 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 SMARCAL1Q9NZC9 954 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 RIMKLBQ9ULI2 386 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 PSMD13Q9UNM6 376 aa16.3■□□□□ 0.2
PKP3-209ENST00000533069 A8MU76 341 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 STMND1H3BQB6 276 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 AP2A2O94973 939 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 APRTP07741 180 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 GSTM1P09488 218 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 MTHFD1P11586 935 aaKnown RBP16.29■□□□□ 0.2
PKP3-209ENST00000533069 ETS1P14921 441 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 TYRP1P17643 537 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 ADRA1DP25100 572 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 MCM3P25205 808 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 RPL22P35268 128 aaKnown RBP16.29■□□□□ 0.2
PKP3-209ENST00000533069 GSTM4Q03013 218 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 C2orf54Q08AI8 447 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 DCAF12Q5T6F0 453 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 CCDC81Q6ZN84 652 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 GSTA5Q7RTV2 222 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 DTX1Q86Y01 620 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 ZFPM2Q8WW38 1151 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 PEX13Q92968 403 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 ART4Q93070 314 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.2
PKP3-209ENST00000533069 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 KRT12Q99456 494 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 ZPBPQ9BS86 351 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 RAB33BQ9H082 229 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 WWP1Q9H0M0 922 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 CPNE5Q9HCH3 593 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 CASS4Q9NQ75 786 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 IMP3Q9NV31 184 aaKnown RBP16.29■□□□□ 0.2
PKP3-209ENST00000533069 OCIAD1Q9NX40 245 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 EPHA6Q9UF33 1036 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 KLHL3Q9UH77 587 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 IGSF10Q6WRI0 2623 aa16.29■□□□□ 0.2
PKP3-209ENST00000533069 K7ENP7 123 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 AP3B1O00203 1094 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 QSOX1O00391 747 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 CAPN5O15484 640 aaPredicted RBP16.28■□□□□ 0.2
PKP3-209ENST00000533069 NSG1P42857 185 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 CDKN1CP49918 316 aaPredicted RBP16.28■□□□□ 0.2
PKP3-209ENST00000533069 TERF1P54274 439 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 GFERP55789 205 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 MC2RQ01718 297 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 ITIH4Q14624 930 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 DBN1Q16643 649 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 CCDC38Q502W7 563 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 INO80CQ6PI98 192 aaPredicted RBP16.28■□□□□ 0.2
PKP3-209ENST00000533069 PRSS42Q7Z5A4 293 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 PRUNE1Q86TP1 453 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 ZFAND4Q86XD8 727 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 KLHL7Q8IXQ5 586 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 GLIS1Q8NBF1 620 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 GPR150Q8NGU9 434 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 RSC1A1Q92681 617 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 ZDHHC12Q96GR4 267 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 C12orf66Q96MD2 445 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 TGM7Q96PF1 710 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 DDX47Q9H0S4 455 aaKnown RBP16.28■□□□□ 0.2
PKP3-209ENST00000533069 FBXO8Q9NRD0 319 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 HEBP2Q9Y5Z4 205 aa16.28■□□□□ 0.2
PKP3-209ENST00000533069 ZSCAN5DPP0CG00 497 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 NDUFS1P28331 727 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 GRIA1P42261 906 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ATP1A2P50993 1020 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ARSDP51689 593 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 RHDQ02161 417 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ACVR1Q04771 509 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 PLCL1Q15111 1095 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 TGIF1Q15583 401 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 SOWAHCQ53LP3 525 aaPredicted RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 TSTD2Q5T7W7 516 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ARHGAP40Q5TG30 622 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 LYPLAL1Q5VWZ2 237 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ZNF449Q6P9G9 518 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 AFTPHQ6ULP2 937 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 XKR5Q6UX68 686 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 CEACAM20Q6UY09 585 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms