RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MEX3BQ6ZN04 569 aaKnown RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 KMT5CQ86Y97 462 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRIM59Q8IWR1 403 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 ARHGAP12Q8IWW6 846 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 CHDHQ8NE62 594 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR8K5Q8NH50 307 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR1L3Q8NH93 324 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 JOSD2Q8TAC2 188 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 CPT1BQ92523 772 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 CCDC47Q96A33 483 aaKnown RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 NTAN1Q96AB6 310 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 GBP5Q96PP8 586 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 PSKH2Q96QS6 385 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 CRACR2AQ9BSW2 395 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 LIME1Q9H400 295 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 RMI1Q9H9A7 625 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 NOD2Q9HC29 1040 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAM207AQ9NSI2 230 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 HIVEP2P31629 2446 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 C2CD4BA6NLJ0 364 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 M0R082 166 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 FOXN3O00409 490 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 KLHL18O94889 574 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 PGLSO95336 258 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 PEX11BO96011 259 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 CPP00450 1065 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 CYP2A6P11509 494 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC9A1P19634 815 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 SYKP43405 635 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 ARCN1P48444 511 aaKnown RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 STC1P52823 247 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 PPP2R2AP63151 447 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 LRRC63Q05C16 580 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRIM65Q6PJ69 517 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 KRBA2Q6ZNG9 492 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 ENOSF1Q7L5Y1 443 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 PHYKPLQ8IUZ5 450 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 GPR150Q8NGU9 434 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF417Q8TAU3 575 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 COG1Q8WTW3 980 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 CLIP3Q96DZ5 547 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 IP6K3Q96PC2 410 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF587Q96SQ5 575 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 TSG101Q99816 390 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 CINPQ9BW66 212 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 TLR10Q9BXR5 811 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 OSGEPL1Q9H4B0 414 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 METTL5Q9NRN9 209 aaKnown RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 POT1Q9NUX5 634 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 TINAGQ9UJW2 476 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 BTRCQ9Y297 605 aa8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
TRAPPC9-212ENST00000521944 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 TLCD2A6NGC4 264 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CHUKO15111 745 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 FZD6O60353 706 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 KLHL41O60662 606 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 SOCS5O75159 536 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CBSLP0DN79 551 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 IL4RP24394 825 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CBSP35520 551 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 PTPN9P43378 593 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 GSK3AP49840 483 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 PLAURQ03405 335 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 AIMP2Q13155 320 aaKnown RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 PLCL1Q15111 1095 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 LONRF1Q17RB8 773 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CCDC40Q4G0X9 1142 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZFYVE27Q5T4F4 411 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 HENMT1Q5T8I9 393 aaKnown RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 AGAP7PQ5VUJ5 663 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 DPY19L2P1Q6NXN4 242 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 WASH2PQ6VEQ5 465 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRIM72Q6ZMU5 477 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 STRADAQ7RTN6 431 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 BIVMQ86UB2 503 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRIM48Q8IWZ4 208 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 TTC30BQ8N4P2 665 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 NPWQ8N729 165 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 TMEM35BQ8NCS4 154 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR2Y1Q8NGV0 311 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAM172AQ8WUF8 416 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CPA5Q8WXQ8 436 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 AGAP4Q96P64 663 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 DHRS4Q9BTZ2 278 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR2AG1Q9H205 316 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 CARD9Q9H257 536 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 GOLPH3LQ9H4A5 285 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 ACTR5Q9H9F9 607 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC6A20Q9NP91 592 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 EGFL7Q9UHF1 273 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 DNAJC16Q9Y2G8 782 aa8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 PTRH2Q9Y3E5 179 aaKnown RBP8.61□□□□□ -1.03
TRAPPC9-212ENST00000521944 OR5K3A6NET4 321 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms