RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	SULT1C3	Q6IMI6	304 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ASRGL1	Q7L266	308 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	AGR3	Q8TD06	166 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ACTRT2	Q8TDY3	377 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ASZ1	Q8WWH4	475 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	CCDC97	Q96F63	343 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ZNF514	Q96K75	400 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	ACOX2	Q99424	681 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	CCDC106	Q9BWC9	280 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	TRIM54	Q9BYV2	358 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	MEAF6	Q9HAF1	191 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	TAGLN3	Q9UI15	199 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PCTP	Q9UKL6	214 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	IKZF3	Q9UKT9	509 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	HCN2	Q9UL51	889 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	TMPRSS11E	Q9UL52	423 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	SCML1	Q9UN30	329 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	CAPN7	Q9Y6W3	813 aa		11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	PTPRZ1	P23471	2315 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-224	ENST00000515711	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ANKRD12	Q6UB98	2062 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ANKRD65	E5RJM6	399 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	PROB1	E7EW31	1015 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711		K7EQS6	105 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ESRRA	P11474	423 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	TEAD1	P28347	426 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	PTPN4	P29074	926 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CCR7	P32248	378 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	DRD3	P35462	400 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	TIE1	P35590	1138 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	GPR1	P46091	355 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CCR10	P46092	362 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	SOX9	P48436	509 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	METAP1	P53582	386 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	MRPS21	P82921	87 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CNTN1	Q12860	1018 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	AGER	Q15109	404 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	PDCD2	Q16342	344 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	BCL7A	Q4VC05	210 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	SYTL3	Q4VX76	610 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	SLC9B1	Q4ZJI4	515 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	KANK2	Q63ZY3	851 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	RAET1G	Q6H3X3	334 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CLYBL	Q8N0X4	340 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CEP70	Q8NHQ1	597 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	MAPK15	Q8TD08	544 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	AGAP11	Q8TF27	550 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	GLMN	Q92990	594 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	PTCD3	Q96EY7	689 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ZNF382	Q96SR6	550 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	CCT7	Q99832	543 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	NUF2	Q9BZD4	464 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	MID1IP1	Q9NPA3	183 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ARHGEF3	Q9NR81	526 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	TRAF6	Q9Y4K3	522 aa		11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	ZFC3H1	O60293	1989 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-224	ENST00000515711	NCF1B	A6NI72	391 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	NCF1C	A8MVU1	366 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	C2CD4D	B7Z1M9	353 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	AZIN1	O14977	448 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	MID1	O15344	667 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	VEGFD	O43915	354 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	VPS4B	O75351	444 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CRCP	O75575	148 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	TM7SF2	O76062	418 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CDK14	O94921	469 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	SIX3	O95343	332 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CBX6	O95503	412 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	ESRRB	O95718	433 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CHEK2	O96017	543 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	ANXA5	P08758	320 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	T-ENOL	P0DO92	83 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	NCF1	P14598	390 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	EZR	P15311	586 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	NQO1	P15559	274 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CYP2A7	P20853	494 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	HK3	P52790	923 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	AP1S2	P56377	157 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	PLOD1	Q02809	727 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	TMEM115	Q12893	351 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	BOP1	Q14137	746 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	TTC31	Q49AM3	519 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	FBXO43	Q4G163	708 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	TMEM196	Q5HYL7	178 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	VWA5B1	Q5TIE3	1220 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	AGBL4	Q5VU57	503 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	KIAA1161	Q6NSJ0	714 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	ADAMTSL4	Q6UY14	1074 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	DET1	Q7L5Y6	550 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	ARHGAP24	Q8N264	748 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	ELMO1	Q92556	727 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	TMEM159	Q96B96	161 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CMTM5	Q96DZ9	223 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	EGFL8	Q99944	293 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	CCM2	Q9BSQ5	444 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	C1QTNF7	Q9BXJ2	289 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	SHCBP1L	Q9BZQ2	653 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	EPG5	Q9HCE0	2579 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms