RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ANOS1P23352 680 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 USP8P40818 1118 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FASLGP48023 281 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 LMAN1P49257 510 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 CCR3P51677 355 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 HNRNPKP61978 463 aaKnown RBP eCLIP3.07□□□□□ -1.92
CHD1-207ENST00000511628 SLC20A2Q08357 652 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 ALCAMQ13740 583 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 MVPQ14764 893 aaKnown RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 MEP1AQ16819 746 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 LETM2Q2VYF4 491 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 RAB6CQ53S08 254 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FAM133BQ5BKY9 247 aaKnown RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 KRBOX4Q5JUW0 171 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FAM72AQ5TYM5 149 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 ALS2CLQ60I27 953 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FAM72DQ6L9T8 149 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 TPRG1Q6ZUI0 275 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FAM47EQ6ZV65 393 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 INTS8Q75QN2 995 aaKnown RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 ZNF534Q76KX8 674 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 CAMKMTQ7Z624 323 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 KRT77Q7Z794 578 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 FAM72BQ86X60 149 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 ODF3L1Q8IXM7 274 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 PM20D2Q8IYS1 436 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 EMC1Q8N766 993 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 TC2NQ8N9U0 490 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 CFAP61Q8NHU2 1237 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 TBC1D16Q8TBP0 767 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 TEKT4Q8WW24 435 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 WBP2Q969T9 261 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 VPS33AQ96AX1 596 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 ZNF830Q96NB3 372 aaPredicted RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 DACH2Q96NX9 599 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 SEMA3CQ99985 751 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 RAB6CQ9H0N0 254 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 KCNK15Q9H427 330 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 RABEP2Q9H5N1 569 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 DENND2DQ9H6A0 471 aaPredicted RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 ZNF334Q9HCZ1 680 aaPredicted RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 MBNL1Q9NR56 388 aaKnown RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 OLAHQ9NV23 265 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 MCM9Q9NXL9 1143 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 HAO2Q9NYQ3 351 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 TAAR2Q9P1P5 351 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 CGNL1Q0VF96 1302 aa3.07□□□□□ -1.92
CHD1-207ENST00000511628 PDS5AQ29RF7 1337 aaKnown RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 ZNF644Q9H582 1327 aaPredicted RBP3.07□□□□□ -1.92
CHD1-207ENST00000511628 A0A1W2PPM1 405 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 A0A1W2PRQ8 180 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 TRBC2A0A5B9 178 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 GOLGA6L9A6NEM1 432 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 HEPACAM2A8MVW5 462 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 ZNF587BE7ETH6 402 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 HS3ST1O14792 307 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 GGPS1O95749 300 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 MYBL1P10243 752 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 MYOD1P15172 320 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 GABRA5P31644 462 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 AMPHP49418 695 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 FUT6P51993 359 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 CD81P60033 236 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 ISL1P61371 349 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 COG7P83436 770 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 RELQ04864 619 aaPredicted RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 CAMK2DQ13557 499 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 PDSS1Q5T2R2 415 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 C6orf163Q5TEZ5 329 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 MEX3BQ6ZN04 569 aaKnown RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 RBPMS2Q6ZRY4 209 aaKnown RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 Q75L30 129 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 SATL1Q86VE3 508 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 KMT5CQ86Y97 462 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD1-207ENST00000511628 RNF113BQ8IZP6 322 aaKnown RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 C1orf87Q8N0U7 546 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 NKAIN3Q8N8D7 197 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 MCUQ8NE86 351 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 OR10S1Q8NGN2 331 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 BBS10Q8TAM1 723 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 WDR20Q8TBZ3 569 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 GRAPLQ8TC17 118 aaPredicted RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 UTP15Q8TED0 518 aaKnown RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 SLC20A1Q8WUM9 679 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 SLC38A5Q8WUX1 472 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 ERLEC1Q96DZ1 483 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 TTC14Q96N46 770 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 ZNF583Q96ND8 569 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 DUX3Q96PT4 197 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 SLC22A12Q96S37 553 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 C16orf70Q9BSU1 422 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 TMEM39BQ9GZU3 492 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 CSTL1Q9H114 145 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 MMP27Q9H306 513 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 OPA3Q9H6K4 179 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 SH3GLB2Q9NR46 395 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 FAM118AQ9NWS6 357 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms