RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 HDAC11Q96DB2 347 aa7.37□□□□□ -1.23
CCSER1-208ENST00000509109 TSGA13Q96PP4 275 aa7.37□□□□□ -1.23
CCSER1-208ENST00000509109 TDRD1Q9BXT4 1180 aaKnown RBP7.37□□□□□ -1.23
CCSER1-208ENST00000509109 SUDS3Q9H7L9 328 aaPredicted RBP7.37□□□□□ -1.23
CCSER1-208ENST00000509109 RMI1Q9H9A7 625 aa7.37□□□□□ -1.23
CCSER1-208ENST00000509109 RBM22Q9NW64 420 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCSER1-208ENST00000509109 IFNKQ9P0W0 207 aa7.37□□□□□ -1.23
CCSER1-208ENST00000509109 VPS18Q9P253 973 aa7.37□□□□□ -1.23
CCSER1-208ENST00000509109 C1orf232A0A0U1RR37 186 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PMS2P1A4D2B8 440 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 GPR89AB7ZAQ6 455 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 STMND1H3BQB6 276 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PPP1R12AO14974 1030 aaPredicted RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 DUX1O43812 170 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 AKR1B10O60218 316 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 FGF1P05230 155 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CD48P09326 243 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 GPR89BP0CG08 455 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 IFNGR1P15260 489 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 ZFXP17010 805 aaPredicted RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 IL4RP24394 825 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 ALDH4A1P30038 563 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 HNRNPH3P31942 346 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CASP14P31944 242 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 ADCY8P40145 1251 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 NOP2P46087 812 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 FASLGP48023 281 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 GIPRP48546 466 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 ERVFRD-1P60508 538 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PPP2R5EQ16537 467 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 AMZ1Q400G9 498 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 MANEAQ5SRI9 462 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 KCTD16Q68DU8 428 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 TECPR1Q7Z6L1 1165 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 TSPAN33Q86UF1 283 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 C17orf82Q86X59 251 aaPredicted RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PHYKPLQ8IUZ5 450 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 RHOT2Q8IXI1 618 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CCDC13Q8IYE1 715 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PELI3Q8N2H9 469 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CBARPQ8N350 705 aaPredicted RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 ZNF843Q8N446 348 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CCNYQ8ND76 341 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 LPCAT1Q8NF37 534 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 OR10G6Q8NH81 332 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CCL4L1Q8NHW4 92 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PIH1D2Q8WWB5 315 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 FAF2Q96CS3 445 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 SGF29Q96ES7 293 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 MED8Q96G25 268 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 AHCYL2Q96HN2 611 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 LYSMD1Q96S90 227 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 SRPK1Q96SB4 655 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 HERPUD2Q9BSE4 406 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 EPB41L1Q9H4G0 881 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PCDH9Q9HC56 1237 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 SPATS2LQ9NUQ6 558 aaKnown RBP7.36□□□□□ -1.23
CCSER1-208ENST00000509109 PKD2L2Q9NZM6 624 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 KLHL14Q9P2G3 628 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 CD84Q9UIB8 345 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 KCTD3Q9Y597 815 aa7.36□□□□□ -1.23
CCSER1-208ENST00000509109 BSNQ9UPA5 3926 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PRAMEF33A0A0G2JMD5 474 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 LRRD1A4D1F6 860 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PRAMEF10O60809 474 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 C1QL1O75973 258 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 MTA2O94776 668 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ASMTLO95671 621 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 SOD1P00441 154 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PRB1P04280 392 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 HLA-DQB2P05538 268 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PDHA1P08559 390 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 MSL3P1P0C860 447 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 SFTPCP11686 197 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 HGFP14210 728 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ITIH1P19827 911 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 AK4P27144 223 aaPredicted RBP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 CSTF2P33240 577 aaKnown RBP eCLIP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ARHGAP25P42331 645 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ARSEP51690 589 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 MAPK10P53779 464 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 IFI35P80217 286 aaPredicted RBP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 B4GALNT1Q00973 533 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 DSC2Q02487 901 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 GBE1Q04446 702 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PPIDQ08752 370 aaKnown RBP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PDK1Q15118 436 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ZNF569Q5MCW4 686 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 PDPK2PQ6A1A2 396 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 USP53Q70EK8 1073 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 BZW1Q7L1Q6 419 aaKnown RBP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 NRROSQ86YC3 692 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.35□□□□□ -1.23
CCSER1-208ENST00000509109 OR4D9Q8NGE8 314 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 SCAMP4Q969E2 229 aa7.35□□□□□ -1.23
CCSER1-208ENST00000509109 SH3KBP1Q96B97 665 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms