RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 COX16Q9P0S2 106 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 VPS18Q9P253 973 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 DHCR7Q9UBM7 475 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SLC12A6Q9UHW9 1150 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 GNPTGQ9UJJ9 305 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 WDR37Q9Y2I8 494 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 MED12LQ86YW9 2145 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 OR5K3A6NET4 321 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NPIPB15A6NHN6 443 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 VSTM2BA6NLU5 285 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ESPNB1AK53 854 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 E5RJQ4 531 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 H3BQV1 296 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 M0QYV0 167 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 KDELR3O43731 214 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 GPRIN2O60269 458 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 EXOC3O60645 756 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 USP1O94782 785 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 RHOBTB3O94955 611 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 VENTXO95231 258 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 BMP10O95393 424 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 HSP90AA1P07900 732 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ITGAMP11215 1152 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ITGA2P17301 1181 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 CYP2A7P20853 494 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 SOX5P35711 763 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ETFBP38117 255 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PEX19P40855 299 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 GCLMP48507 274 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 GEMIN4P57678 1058 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 RHOAP61586 193 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 DCDP81605 110 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TMPRSS15P98073 1019 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 RAD51Q06609 339 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ADCY2Q08462 1091 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PAK1Q13153 545 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 MTA1Q13330 715 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 CNGA2Q16280 664 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NKG7Q16617 165 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 INO80DQ53TQ3 878 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TREML4Q6UXN2 200 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 WASH2PQ6VEQ5 465 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TRIM72Q6ZMU5 477 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 CDHR3Q6ZTQ4 885 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ACAD11Q709F0 780 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 BNIPLQ7Z465 357 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM110Q86TL2 294 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TSPAN33Q86UF1 283 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PAQR7Q86WK9 346 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF227Q86WZ6 799 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 DNAAF5Q86Y56 855 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 HSCBQ8IWL3 235 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NELFCDQ8IXH7 590 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 KBTBD2Q8IY47 623 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 CARFQ8N187 725 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TTC39CQ8N584 583 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 MEIOBQ8N635 442 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 LINC01560Q8TB33 94 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 SLC22A8Q8TCC7 542 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PROKR1Q8TCW9 393 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 SMPDL3BQ92485 455 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 RNASE6Q93091 150 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 SCAMP4Q969E2 229 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NT5C3BQ969T7 300 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 C8orf44Q96CB5 159 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ZBED6CLQ96FA7 236 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PGAP3Q96FM1 320 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ZSCAN31Q96LW9 406 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TUBGCP5Q96RT8 1024 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NPAS2Q99743 824 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 C17orf62Q9BQA9 187 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 BEX2Q9BXY8 128 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PITPNM3Q9BZ71 974 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ZCCHC2Q9C0B9 1178 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 DNAI2Q9GZS0 605 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 KLHL25Q9H0H3 589 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 ABCG8Q9H221 673 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 SLC26A1Q9H2B4 701 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 THAP9Q9H5L6 903 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 FAM204AQ9H8W3 233 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 WDR54Q9H977 334 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 PDFQ9HBH1 243 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 IFT80Q9P2H3 777 aaPredicted RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 TFIP11Q9UBB9 837 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 NDOR1Q9UHB4 597 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 CDC23Q9UJX2 597 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 LIMCH1Q9UPQ0 1083 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 DNAJC16Q9Y2G8 782 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 WBP11Q9Y2W2 641 aaKnown RBP3.2□□□□□ -1.9
TCOF1-208ENST00000506063 DNAH1Q9P2D7 4330 aa3.2□□□□□ -1.9
TCOF1-208ENST00000506063 UBA6A0AVT1 1052 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM89A2RUT3 159 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TUBAL3A6NHL2 446 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 FADS2P1A8MWK0 482 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 E7EQ34 232 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CHUKO15111 745 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TTI1O43156 1089 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SART1O43290 800 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NUAK1O60285 661 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MAN1A2O60476 641 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms