RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF648Q5T619 568 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 AGBL4Q5VU57 503 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 CLEC6AQ6EIG7 209 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 TRMT11Q7Z4G4 463 aaKnown RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 KIF2BQ8N4N8 673 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 AADATQ8N5Z0 425 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 OR2T3Q8NH03 318 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 TRPC4APQ8TEL6 797 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 UBTD2Q8WUN7 234 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 SKA2Q8WVK7 121 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 BTN2A2Q8WVV5 523 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 DNASE1L2Q92874 299 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 GLMNQ92990 594 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 C19orf60Q96EN9 201 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 PTCD3Q96EY7 689 aaKnown RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 CATSPER2Q96P56 530 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 OR52B2Q96RD2 323 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 TUBB6Q9BUF5 446 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 CCDC28BQ9BUN5 200 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 CCDC106Q9BWC9 280 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 REPIN1Q9BWE0 567 aaKnown RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 C1QTNF3Q9BXJ4 246 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 RSPH9Q9H1X1 276 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 FBRSQ9HAH7 460 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 SEMA4BQ9NPR2 832 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 TAGLN3Q9UI15 199 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 LNPEPQ9UIQ6 1025 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 SORCS3Q9UPU3 1222 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 STK38LQ9Y2H1 464 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 FADS3Q9Y5Q0 445 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 PIAS3Q9Y6X2 628 aa7.94□□□□□ -1.14
PDZRN3-212ENST00000498048 A0A1W2PP55 124 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 A0A1W2PPC1 479 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 CAPN14A8MX76 684 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 UBFD1O14562 309 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 AZIN1O14977 448 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TSPAN6O43657 245 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 AP1G1O43747 822 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 NUAK1O60285 661 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 MMP20O60882 483 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 CDK14O94921 469 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 KLF8O95600 359 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 MLYCDO95822 493 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 GUCA1CO95843 209 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 SOD1P00441 154 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 EGFP01133 1207 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 PCCBP05166 539 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 C8GP07360 202 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 ENO2P09104 434 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 GSTM1P09488 218 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 EZRP15311 586 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 AOC1P19801 751 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 CYP2A7P20853 494 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 C5AR1P21730 350 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 NTSR1P30989 418 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 CCR7P32248 378 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 KIR2DL1P43626 348 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 CPA2P48052 419 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 GALK1P51570 392 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 KCNJ2P63252 427 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 MXRA7P84157 204 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 GSTM4Q03013 218 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 HSPA14Q0VDF9 509 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 PHKG1Q16816 387 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 LSM12Q3MHD2 195 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 LRIT3Q3SXY7 679 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TTC31Q49AM3 519 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 KANK2Q63ZY3 851 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 SDE2Q6IQ49 451 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 UBE2R2Q712K3 238 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 ASRGL1Q7L266 308 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 EFL1Q7Z2Z2 1120 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TRIM74Q86UV6 250 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 RALGPS2Q86X27 583 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TREML1Q86YW5 311 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TRAPPC5Q8IUR0 188 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 HDDC3Q8N4P3 179 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 BEND7Q8N7W2 519 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 OR56A4Q8NGH8 313 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TWIST2Q8WVJ9 160 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 EZH1Q92800 747 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 NSL1Q96IY1 281 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 MARK4Q96L34 752 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 ZNF382Q96SR6 550 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TMEM79Q9BSE2 394 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 NUSAP1Q9BXS6 441 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 WDR55Q9H6Y2 383 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 UBE2ZQ9H832 354 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 MEAF6Q9HAF1 191 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 SLC40A1Q9NP59 571 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TNFRSF12AQ9NP84 129 aa7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TNPO3Q9Y5L0 923 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 ARHGEF17Q96PE2 2063 aaPredicted RBP7.93□□□□□ -1.14
PDZRN3-212ENST00000498048 TMEM131Q92545 1883 aa7.92□□□□□ -1.14
PDZRN3-212ENST00000498048 K7EQS6 105 aa7.92□□□□□ -1.14
PDZRN3-212ENST00000498048 K7ESM1 405 aa7.92□□□□□ -1.14
PDZRN3-212ENST00000498048 E2F3O00716 465 aa7.92□□□□□ -1.14
PDZRN3-212ENST00000498048 PIP5K1BO14986 540 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms