RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF140P52738 457 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 CYP4F2P78329 520 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 MC2RQ01718 297 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 GPR18Q14330 331 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LINC00303Q3SY05 128 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LDLRAP1Q5SW96 308 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LINC00523Q86TU6 105 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 AMZ2Q86W34 360 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 FAM129CQ86XR2 697 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 DNAAF3Q8N9W5 541 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 OR13C4Q8NGS5 318 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 GPR150Q8NGU9 434 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 BRSK1Q8TDC3 778 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 RSC1A1Q92681 617 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 SGF29Q96ES7 293 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 TBL1YQ9BQ87 522 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 TRIM51Q9BSJ1 452 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 ARNT2Q9HBZ2 717 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 APMAPQ9HDC9 416 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 SPTA1P02549 2419 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 STMND1H3BQB6 276 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 NDC80O14777 642 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 KIF1CO43896 1103 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 SRP72O76094 671 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 UBXN7O94888 489 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 VIPP01282 170 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 ANKRD34CP0C6C1 535 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 PPP1CAP62136 330 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 SEMA5AQ13591 1074 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 NFE2L1Q14494 772 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 RPE65Q16518 533 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 TAF1BQ53T94 588 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 MANEAQ5SRI9 462 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 FNBP1LQ5T0N5 605 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 DET1Q7L5Y6 550 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 TIPARPQ7Z3E1 657 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 EXD3Q8N9H8 876 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 AVL9Q8NBF6 648 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 C9orf72Q96LT7 481 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 EPB41L1Q9H4G0 881 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 L2HGDHQ9H9P8 463 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 FBXO8Q9NRD0 319 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 PILRAQ9UKJ1 303 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 PSMD13Q9UNM6 376 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
SEC61A1-206ENST00000491668 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 EIF4E1BA6NMX2 242 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 CAPN5O15484 640 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 TPH1P17752 444 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 PPM1FP49593 454 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 CDK16Q00536 496 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 CALCOCO2Q13137 446 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 ITGA9Q13797 1035 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 GTF2H3Q13889 308 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 DCAF12Q5T6F0 453 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 IZUMO3Q5VZ72 239 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 PLXDC1Q8IUK5 500 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 TRIM48Q8IWZ4 208 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 MMGT1Q8N4V1 131 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 SNF8Q96H20 258 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 TTC25Q96NG3 672 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 TGM7Q96PF1 710 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 ERP44Q9BS26 406 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 LRRC1Q9BTT6 524 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 ASPSCR1Q9BZE9 553 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 ZMYND15Q9H091 742 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 ASB8Q9H765 288 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
SEC61A1-206ENST00000491668 C2orf81A6NN90 581 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 AP3B1O00203 1094 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 KCNJ13O60928 360 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 PRSS56P0CW18 603 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 LIFP15018 202 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF28P17035 718 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 VCLP18206 1134 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 PBLDP30039 288 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 AKT1P31749 480 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 CAPZBP47756 277 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms