RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLC16A5O15375 505 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 FFAR2O15552 330 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 GPC4O75487 556 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ENO2P09104 434 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 NCF1P14598 390 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 VCLP18206 1134 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 RPL14P50914 215 aaKnown RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 HK3P52790 923 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 FGL2Q14314 439 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ANKS6Q68DC2 871 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 CCDC121Q6ZUS5 278 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF687Q8N1G0 1237 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 PDPRQ8NCN5 879 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 SKA2Q8WVK7 121 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 KLK6Q92876 244 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM159Q96B96 161 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 C1QTNF3Q9BXJ4 246 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 TEX101Q9BY14 249 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ABCF3Q9NUQ8 709 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 UTP6Q9NYH9 597 aaKnown RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 VTI1BQ9UEU0 232 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 ADAMTS6Q9UKP5 1117 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 GPR34Q9UPC5 381 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 LRRC72A6NJI9 287 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 LILRB5O75023 590 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 PAK4O96013 591 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF8P17098 575 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 MAPK9P45984 424 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 TPMTP51580 245 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 CCR3P51677 355 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 STARD6P59095 220 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 PPP2CBP62714 309 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 PPP2CAP67775 309 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 UBXN2BQ14CS0 331 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 SH2D4BQ5SQS7 431 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 UBE2R2Q712K3 238 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 RPS27LQ71UM5 84 aaKnown RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 SYT13Q7L8C5 426 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 TRIM69Q86WT6 500 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 VRK3Q8IV63 474 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 FLCNQ8NFG4 579 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 OR2T34Q8NGX1 318 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 AGR3Q8TD06 166 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 FAR2Q96K12 515 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 LINC00615Q96LM1 132 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 EGFL8Q99944 293 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 TRIM54Q9BYV2 358 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 SHCBP1LQ9BZQ2 653 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 COG4Q9H9E3 785 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 SGK2Q9HBY8 427 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 LTB4R2Q9NPC1 389 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 PRDM6Q9NQX0 595 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 MBNL1Q9NR56 388 aaKnown RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 ZDHHC2Q9UIJ5 367 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
TRAF4-210ENST00000475329 TNPO3Q9Y5L0 923 aaKnown RBP13.47□□□□□ -0.25
TRAF4-210ENST00000475329 COL6A3P12111 3177 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 KANSL1LA0AUZ9 987 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 SLC5A10A0PJK1 596 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 KRBA1A5PL33 1030 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM202A6NGA9 273 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 LRRC14BA6NHZ5 514 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 GPR89AB7ZAQ6 455 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 MATN2O00339 956 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 HDAC3O15379 428 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 CYP2A7P20853 494 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 MAT2AP31153 395 aaKnown RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 IGFALSP35858 605 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 TRIM23P36406 574 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 AGTR2P50052 363 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 CDKL1Q00532 357 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 CLCQ05315 142 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 INPP5AQ14642 412 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 PHKG1Q16816 387 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF658BQ4V348 819 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 CDKL4Q5MAI5 379 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 SULT1C3Q6IMI6 304 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 MAVSQ7Z434 540 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 SLC22A15Q8IZD6 547 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms