RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 HMGA1P17096 107 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 RPL17P18621 184 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 MSX2P35548 267 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 HMGCLP35914 325 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 SPAM1P38567 509 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 RGRP47804 291 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 KCNC1P48547 511 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 CSNK1DP48730 415 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 DGKGP49619 791 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 CCNHP51946 323 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 POLR2JP52435 117 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 TRAF2Q12933 501 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 PRKG2Q13237 762 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 RCAN2Q14206 197 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 IHHQ14623 411 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 PCBP2Q15366 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMC4-212ENST00000470240 IMPG1Q17R60 797 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 SMU1Q2TAY7 513 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 C11orf91Q3C1V1 193 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 GPR33Q49SQ1 333 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 VPS26BQ4G0F5 336 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 XKR7Q5GH72 579 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 TMTC4Q5T4D3 741 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 INTS11Q5TA45 600 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 TMEM164Q5U3C3 297 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 CACHD1Q5VU97 1274 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 GRAMD4Q6IC98 578 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 SULT1C3Q6IMI6 304 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 PSAPL1Q6NUJ1 521 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 C8orf82Q6P1X6 216 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 CNKSR3Q6P9H4 555 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 TTC23LQ6PF05 361 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 SNX20Q7Z614 316 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 SYVN1Q86TM6 617 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 TICAM1Q8IUC6 712 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 CPNE9Q8IYJ1 553 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ELMOD1Q8N336 334 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 TTC30BQ8N4P2 665 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 TRIML2Q8N7C3 387 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ZNF557Q8N988 423 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 FAM156AQ8NDB6 213 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 OR9I1Q8NGQ6 314 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 METTL6Q8TCB7 284 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 NAT14Q8WUY8 206 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 EEF1AKMT1Q8WVE0 214 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 LRTOMTQ8WZ04 291 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ULK4Q96C45 1275 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 SDCCAG3Q96C92 435 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 MYEOVQ96EZ4 313 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 RMND5BQ96G75 393 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 PDLIM5Q96HC4 596 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 SLC45A3Q96JT2 553 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 CAPNS2Q96L46 248 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ZNF597Q96LX8 424 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 MAGEB10Q96LZ2 347 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 C3orf30Q96M34 536 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 NSUN5Q96P11 429 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 SH3GL1Q99961 368 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 GPATCH1Q9BRR8 931 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 TMEM79Q9BSE2 394 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 BRINP2Q9C0B6 783 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 PCDHAC1Q9H158 963 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 IL1RL2Q9HB29 575 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ZFYVE1Q9HBF4 777 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 FBRSL1Q9HCM7 1045 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 TNFRSF12AQ9NP84 129 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMC4-212ENST00000470240 MRPL17Q9NRX2 175 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 CCM2LQ9NUG4 571 aaPredicted RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 SMPD4Q9NXE4 827 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 OPTCQ9UBM4 332 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 LHX3Q9UBR4 397 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 EIF2B4Q9UI10 523 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 MAGEL2Q9UJ55 1249 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 ANAPC2Q9UJX6 822 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 DMTF1Q9Y222 760 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 EIF3LQ9Y262 564 aaKnown RBP7.88□□□□□ -1.15
SMC4-212ENST00000470240 MYRFQ9Y2G1 1151 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 DHRS7Q9Y394 339 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 GPR45Q9Y5Y3 372 aa7.88□□□□□ -1.15
SMC4-212ENST00000470240 GLYATL1P3A0A0U1RQE8 302 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 C1orf232A0A0U1RR37 186 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 RNF103-CHMP3A0A140T963 221 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
SMC4-212ENST00000470240 A0A1W2PQ67 120 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 NME4O00746 187 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 ARPC2O15144 300 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 GSTA4O15217 222 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 SNAP91O60641 907 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
SMC4-212ENST00000470240 FKTNO75072 461 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 WDR47O94967 919 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 OR4F21O95013 312 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 PRAMEF1O95521 474 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 CXCL10P02778 98 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 CAPNS1P04632 268 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 CBSLP0DN79 551 aa7.87□□□□□ -1.15
SMC4-212ENST00000470240 PFKLP17858 780 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms