RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCNB1IP1Q9NPC3 277 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TRPV5Q9NQA5 729 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CATSPERZQ9NTU4 200 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PIM2Q9P1W9 311 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 LIMD1Q9UGP4 676 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 ZNF229Q9UJW7 825 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 OSGIN1Q9UJX0 560 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 IPPQ9Y573 584 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PCDHGA10Q9Y5H3 936 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CSADQ9Y600 493 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 MBLAC1A4D2B0 266 aaPredicted RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 CLDN24A6NM45 220 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 PTGES3LE9PB15 166 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 GNGT2O14610 69 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 CXCL11O14625 94 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 PRMT5O14744 637 aaPredicted RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 ANKRD28O15084 1053 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 RHOBTB1O94844 696 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 PTTG1O95997 202 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 FGF1P05230 155 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 HLA-DPA1P20036 260 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 PRDX3P30048 256 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 CD6P30203 668 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 UGT2B10P36537 528 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 BAG6P46379 1132 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ALDH7A1P49419 539 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 ST13P50502 369 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 IST1P53990 364 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 SLC35A2P78381 396 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KEAP1Q14145 624 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 IHHQ14623 411 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KIAA0040Q15053 153 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 TSNQ15631 228 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 ZNF792Q3KQV3 632 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 SLX4IPQ5VYV7 408 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 IL31Q6EBC2 164 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 CAPN13Q6MZZ7 669 aaPredicted RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 CYP20A1Q6UW02 462 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 Q6ZSR9 355 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 B3GNT8Q7Z7M8 397 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 GPR149Q86SP6 731 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 DCP2Q8IU60 420 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 SNX29P2Q8IUI4 249 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 FAM126BQ8IXS8 530 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 NKAPQ8N5F7 415 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 ARL10Q8N8L6 244 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 OR4L1Q8NH43 312 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 FBXO30Q8TB52 745 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ARRDC2Q8TBH0 407 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 TRPM4Q8TD43 1214 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 FIG4Q92562 907 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 RHBDF1Q96CC6 855 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 C1orf74Q96LT6 269 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 SH3GL1Q99961 368 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KATNBL1Q9H079 304 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 EHD1Q9H4M9 534 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ACTL8Q9H568 366 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KAT8Q9H7Z6 458 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 AGO3Q9H9G7 860 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 LTB4R2Q9NPC1 389 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ABCC13Q9NSE7 274 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 TAS2R13Q9NYV9 303 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP48-206ENST00000464577 ERVK-18Q9QC07 812 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KLQ9UEF7 1012 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ADGRE2Q9UHX3 823 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 POU2F3Q9UKI9 436 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 IKZF3Q9UKT9 509 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 TESMINQ9Y4I5 508 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 KCTD3Q9Y597 815 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 HS3ST4Q9Y661 456 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 A3GALT2U3KPV4 340 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 BRCA1P38398 1863 aaKnown RBP7.19□□□□□ -1.26
USP48-206ENST00000464577 PATJQ8NI35 1801 aa7.19□□□□□ -1.26
USP48-206ENST00000464577 ELOVL7A1L3X0 281 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 FAM220BPB1ANY3 271 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CXCR6O00574 342 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 RHOQP17081 205 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CD9P21926 228 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ADCYAP1R1P41586 468 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MASP1P48740 699 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 HUNKP57058 714 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 VBP1P61758 197 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 TUBA1BP68363 451 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 IL5RAQ01344 420 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CYP4F3Q08477 520 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ITKQ08881 620 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CLCA4Q14CN2 919 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 NPTX1Q15818 432 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SMU1Q2TAY7 513 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 LRIT3Q3SXY7 679 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SETMARQ53H47 684 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 TMEM236Q5W0B7 351 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MSANTD2Q6P1R3 559 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SHQ1Q6PI26 577 aaKnown RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 PAQR3Q6TCH7 311 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 TUBA1AQ71U36 451 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms