RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF628Q5EBL2 1059 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 C9orf50Q5SZB4 431 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 ALS2CLQ60I27 953 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 TMEM211Q6ICI0 200 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 GTF2H2CQ6P1K8 395 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 GFRALQ6UXV0 394 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 FOXL2NBQ6ZUU3 175 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 C9orf139Q6ZV77 190 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 ASB18Q6ZVZ8 466 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 PLEKHM3Q6ZWE6 761 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 Q75L30 129 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 CHST3Q7LGC8 479 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 TMEM219Q86XT9 240 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 ODF3L1Q8IXM7 274 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 MUC20Q8N307 709 aaPredicted RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 AFAP1Q8N556 730 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 RDM1Q8NG50 284 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 CFAP61Q8NHU2 1237 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 SPATA20Q8TB22 786 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 WDR20Q8TBZ3 569 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 TMEM255BQ8WV15 326 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 TEKT4Q8WW24 435 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 CD101Q93033 1021 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 PHF21AQ96BD5 680 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 RMDN1Q96DB5 314 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 SPACA9Q96E40 222 aaPredicted RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 ARSGQ96EG1 525 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 HES6Q96HZ4 224 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 FAM81BQ96LP2 452 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 CFAP57Q96MR6 1250 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 ZNF830Q96NB3 372 aaPredicted RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 ZMAT2Q96NC0 199 aaKnown RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 OR6C1Q96RD1 312 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 NEURL2Q9BR09 285 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 SYT17Q9BSW7 474 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 RAB6CQ9H0N0 254 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 SEMA6AQ9H2E6 1030 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 ZCCHC17Q9NP64 241 aaKnown RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 PIH1D3Q9NQM4 214 aaKnown RBP3.96□□□□□ -1.78
CLK1-208ENST00000464454 OLAHQ9NV23 265 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 WDR35Q9P2L0 1181 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 OSGIN1Q9UJX0 560 aa3.96□□□□□ -1.78
CLK1-208ENST00000464454 EDDM13A0A1B0GTR0 161 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 ZCWPW2A0A1B0GU75 182 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 ASPDHA6ND91 283 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TSPY2A6NKD2 308 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TO15178 435 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TSPAN1O60635 241 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 WDR1O75083 606 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 ZNF432O94892 652 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TRUB2O95900 331 aaKnown RBP3.95□□□□□ -1.78
CLK1-208ENST00000464454 FAM106CPP0CH98 169 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TSPY3P0CV98 308 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TSPY8P0CW00 308 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 CETPP11597 493 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 CPT2P23786 658 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 ZNF132P52740 706 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 RAD23AP54725 363 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 CDK3Q00526 305 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TSPY1Q01534 308 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 C6orf163Q5TEZ5 329 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 CST9LP1Q5W188 147 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TEX38Q6PEX7 206 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 FIGLAQ6QHK4 219 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 CCDC186Q7Z3E2 898 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 KRT77Q7Z794 578 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 TTC30BQ8N4P2 665 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 METTL27Q8N6F8 245 aaPredicted RBP3.95□□□□□ -1.78
CLK1-208ENST00000464454 LMNTD1Q8N9Z9 388 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
CLK1-208ENST00000464454 OR52I2Q8NH67 350 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 EXD1Q8NHP7 514 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 MS4A10Q96PG2 267 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 EPYCQ99645 322 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 GPR88Q9GZN0 384 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 HHATLQ9HCP6 504 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 KLHL1Q9NR64 748 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 ABCF3Q9NUQ8 709 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 DONSONQ9NYP3 566 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 C5AR2Q9P296 337 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 KLHL9Q9P2J3 617 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 OR2W1Q9Y3N9 320 aa3.95□□□□□ -1.78
CLK1-208ENST00000464454 URADA6NGE7 173 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 IFITM10A6NMD0 228 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 BMPR1BO00238 502 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 DVL1O14640 695 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 TADA2AO75478 443 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 BMP10O95393 424 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 CCDC175P0C221 793 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 LINGO3P0C6S8 592 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 ZNF23P17027 643 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 GM2AP17900 193 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 DNASE1P24855 282 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 GABRA5P31644 462 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 FUT6P51993 359 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 PLA2G7Q13093 441 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 FAM76BQ5HYJ3 339 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms