RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DPPA5A6NC42 116 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 STX16-NPEPL1H3BU86 382 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PSMD12O00232 456 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 UBFD1O14562 309 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 STX16O14662 325 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 ACOT8O14734 319 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 KLK8O60259 260 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 VPS4BO75351 444 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 GPC4O75487 556 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 SUPT7LO94864 414 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PRLP01236 227 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PYGLP06737 847 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 RETP07949 1114 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 RHOCP08134 193 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 SNRPB2P08579 225 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 MTHFD2P13995 350 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 UQCRBP14927 111 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 NDUFV2P19404 249 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 LPOP22079 712 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PMLP29590 882 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 NNMTP40261 264 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 KCNC1P48547 511 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 FASTKQ14296 549 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 GALNT3Q14435 633 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 HNRNPA1L2Q32P51 320 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PLK5Q496M5 336 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 FNDC3BQ53EP0 1204 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 INO80DQ53TQ3 878 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 OR52E8Q6IFG1 317 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 C8orf82Q6P1X6 216 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PRR23BQ6ZRT6 265 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 LDB1Q86U70 411 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PIM3Q86V86 326 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 NKAPQ8N5F7 415 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 OR7D4Q8NG98 312 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 OR2T3Q8NH03 318 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 STAG3L4Q8TBR4 150 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 ROPN1LQ96C74 230 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 ASB9Q96DX5 294 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PHF21BQ96EK2 531 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 PPP1R36Q96LQ0 422 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 DUSP15Q9H1R2 295 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 SUDS3Q9H7L9 328 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 TNFRSF12AQ9NP84 129 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 ITM2CQ9NQX7 267 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 SLCO3A1Q9UIG8 710 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 OAS3Q9Y6K5 1087 aaKnown RBP9.77□□□□□ -0.85
PTPRD-207ENST00000463477 ABCA7Q8IZY2 2146 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 PRSS51A0A1B0GVH4 220 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SYCE1LA8MT33 242 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CCL22O00626 93 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SKAP2O75563 359 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 RHOBTB1O94844 696 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 MATN4O95460 622 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 LINGO3P0C6S8 592 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 HLA-EP13747 358 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 ENO3P13929 434 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CD1EP15812 388 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 XRCC1P18887 633 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 DPP6P42658 865 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CTSOP43234 321 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 TTPAP49638 278 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 PSME3P61289 254 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 RAD51Q06609 339 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 GRIK2Q13002 908 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CYTH1Q15438 398 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SPATS1Q496A3 300 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 COQ5Q5HYK3 327 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 RNF219Q5W0B1 726 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 KANK2Q63ZY3 851 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 EFL1Q7Z2Z2 1120 aaKnown RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 TICAM1Q8IUC6 712 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 PTGR2Q8N8N7 351 aaPredicted RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 ADCY4Q8NFM4 1077 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 TSPEARQ8WU66 669 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 RLN3Q8WXF3 142 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 C19orf60Q96EN9 201 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SIPA1Q96FS4 1042 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SPACA7Q96KW9 195 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 NUSAP1Q9BXS6 441 aaKnown RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 ADGRE3Q9BY15 652 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 UNKQ9C0B0 810 aaKnown RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CCDC68Q9H2F9 335 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 PRSS16Q9NQE7 514 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 TMEM45AQ9NWC5 275 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 CNOT11Q9UKZ1 510 aaKnown RBP9.76□□□□□ -0.85
PTPRD-207ENST00000463477 MED16Q9Y2X0 877 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 PCDHGA7Q9Y5G6 932 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SPO11Q9Y5K1 396 aa9.76□□□□□ -0.85
PTPRD-207ENST00000463477 SPAG17Q6Q759 2223 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 ANKRD12Q6UB98 2062 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 CXorf51AA0A1B0GTR3 108 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 H0YJX3 145 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 FBP2O00757 339 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 AZIN1O14977 448 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms