RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CLDN7O95471 211 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 SLC35E2BP0CK96 405 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 PRSS56P0CW18 603 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 GDI1P31150 447 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 POLR2LP62875 67 aaKnown RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 SF3A3Q12874 501 aaKnown RBP eCLIP10.25□□□□□ -0.77
HERC4-207ENST00000460168 EIF4HQ15056 248 aaKnown RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 ZRANB3Q5FWF4 1079 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 GDPD4Q6W3E5 623 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 RGS9BPQ6ZS82 235 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 FAM124AQ86V42 546 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 CEP97Q8IW35 865 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 PLD6Q8N2A8 252 aaKnown RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 TERB1Q8NA31 727 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 EID2BQ96D98 161 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 SLC47A1Q96FL8 570 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 VPS35Q96QK1 796 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 OMDQ99983 421 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 RAD21L1Q9H4I0 556 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 DENND2DQ9H6A0 471 aaPredicted RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 CAAP1Q9H8G2 361 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 GIN1Q9NXP7 522 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 TMEM216Q9P0N5 145 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 SLC7A8Q9UHI5 535 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 ANKRD6Q9Y2G4 727 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 ACOT9Q9Y305 439 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 MTCH2Q9Y6C9 303 aa10.25□□□□□ -0.77
HERC4-207ENST00000460168 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.25□□□□□ -0.77
HERC4-207ENST00000460168 NPIPB15A6NHN6 443 aaPredicted RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 WASH3PC4AMC7 463 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 H3BUI4 141 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 H7C0S8 307 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 PLIN3O60664 434 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 NDUFS3O75489 264 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 BGNP21810 368 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 GJA4P35212 333 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 BCAP31P51572 246 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 TAS2R39P59534 338 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 S100A12P80511 92 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 FAPQ12884 760 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 SSPNQ14714 243 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 GRIN2CQ14957 1233 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 TYSND1Q2T9J0 566 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 FNDC3BQ53EP0 1204 aaKnown RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 LRRC73Q5JTD7 316 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 BRAT1Q6PJG6 821 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 NUDCD3Q8IVD9 361 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 ZNF565Q8N9K5 539 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 VOPP1Q96AW1 172 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 HSPBAP1Q96EW2 488 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 SCRN2Q96FV2 425 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 TSPAN17Q96FV3 270 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 ELAC2Q9BQ52 826 aaKnown RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 TRMT61BQ9BVS5 477 aaKnown RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 MTG2Q9H4K7 406 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 SLCO1B3Q9NPD5 702 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 INTS10Q9NVR2 710 aaKnown RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 IL36AQ9UHA7 158 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 ERVK-11Q9UQG0 969 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 IFT52Q9Y366 437 aa10.24□□□□□ -0.77
HERC4-207ENST00000460168 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
HERC4-207ENST00000460168 NDUFA2O43678 99 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 DNAJC6O75061 913 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 GPC4O75487 556 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 GSTM1P09488 218 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TCEA1P23193 301 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 LTBRP36941 435 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TTPAP49638 278 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 IST1P53990 364 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 SEMG2Q02383 582 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 ILF2Q12905 390 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 PEX6Q13608 980 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 ITIH4Q14624 930 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TGFBIQ15582 683 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 AARS2Q5JTZ9 985 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 HECTD2Q5U5R9 776 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 LRRC66Q68CR7 880 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 PSAPL1Q6NUJ1 521 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 FAM151BQ6UXP7 276 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TPRG1Q6ZUI0 275 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TAS2R42Q7RTR8 314 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 CLEC14AQ86T13 490 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TSPAN33Q86UF1 283 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 NKAIN3Q8N8D7 197 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.23□□□□□ -0.77
HERC4-207ENST00000460168 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 OLFM1Q99784 485 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TTYH1Q9H313 450 aaPredicted RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 FAM96AQ9H5X1 160 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 NMRAL1Q9HBL8 299 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 MBD2Q9UBB5 411 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 EMCNQ9ULC0 261 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms