RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C8GP07360 202 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 TBC1D3HP0C7X1 549 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 NCF1P14598 390 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 EEF1DP29692 281 aaKnown RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 SP140Q13342 867 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 SYTL3Q4VX76 610 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 HABP4Q5JVS0 413 aaKnown RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 TBC1D3GQ6DHY5 549 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 TBC1D3CQ6IPX1 549 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 TBC1D3Q8IZP1 549 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 LINC00615Q96LM1 132 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 MBNL1Q9NR56 388 aaKnown RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 ABCF3Q9NUQ8 709 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 DNAJC28Q9NX36 388 aa23.97■■□□□ 1.43
U2AF1-204ENST00000459639 UTP6Q9NYH9 597 aaKnown RBP23.97■■□□□ 1.43
U2AF1-204ENST00000459639 SLC16A5O15375 505 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 PAK4O96013 591 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-204ENST00000459639 ENO2P09104 434 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-204ENST00000459639 VCLP18206 1134 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 TARSP26639 723 aaKnown RBP23.96■■□□□ 1.43
U2AF1-204ENST00000459639 TRIM23P36406 574 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 TPMTP51580 245 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 DGKEP52429 567 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 ZNF658BQ4V348 819 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-204ENST00000459639 ANKS6Q68DC2 871 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 SYT13Q7L8C5 426 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 TRAPPC5Q8IUR0 188 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 VRK3Q8IV63 474 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 CCT6BQ92526 530 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 TMEM159Q96B96 161 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 SHDQ96IW2 340 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 WDR26Q9H7D7 661 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 PRDM6Q9NQX0 595 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 VTI1BQ9UEU0 232 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 ZDHHC2Q9UIJ5 367 aa23.96■■□□□ 1.43
U2AF1-204ENST00000459639 SLC5A10A0PJK1 596 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 TMEM202A6NGA9 273 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 ZNF195O14628 629 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 KIAA0754O94854 1291 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 ZNF8P17098 575 aaPredicted RBP23.95■■□□□ 1.43
U2AF1-204ENST00000459639 PHKG1Q16816 387 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 CDKL4Q5MAI5 379 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 MAVSQ7Z434 540 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 CUZD1Q86UP6 607 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 FAM124AQ86V42 546 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 COG4Q9H9E3 785 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 LMAN1LQ9HAT1 526 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 LTB4R2Q9NPC1 389 aa23.95■■□□□ 1.43
U2AF1-204ENST00000459639 MATN2O00339 956 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 HNRNPH2P55795 449 aaKnown RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 STARD6P59095 220 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 INPP5AQ14642 412 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 CCDC121Q6ZUS5 278 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 RPS27LQ71UM5 84 aaKnown RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 MAFAQ8NHW3 353 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 AGR3Q8TD06 166 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 ZNF483Q8TF39 744 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 HMGB4Q8WW32 186 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 ASB11Q8WXH4 323 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 DLG3Q92796 817 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 KLK6Q92876 244 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 LRRC37BQ96QE4 947 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 SLC12A9Q9BXP2 914 aa23.95■■□□□ 1.42
U2AF1-204ENST00000459639 PHPT1Q9NRX4 125 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 USP36Q9P275 1121 aaKnown RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 TNPO3Q9Y5L0 923 aaKnown RBP23.95■■□□□ 1.42
U2AF1-204ENST00000459639 C17orf113A0A1B0GUU1 675 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 KRBA1A5PL33 1030 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 LRRC14BA6NHZ5 514 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 GPR89AB7ZAQ6 455 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 LIN7AO14910 233 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-204ENST00000459639 CHUKO15111 745 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 HDAC3O15379 428 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 GPR89BP0CG08 455 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 PPP2CBP62714 309 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 PPP2CAP67775 309 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 CDKL1Q00532 357 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 PCBP2Q15366 365 aaKnown RBP eCLIP23.94■■□□□ 1.42
U2AF1-204ENST00000459639 SH2D4BQ5SQS7 431 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 SULT1C3Q6IMI6 304 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 UBE2R2Q712K3 238 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-204ENST00000459639 TRIM69Q86WT6 500 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 RASGRP3Q8IV61 690 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 AFAP1L2Q8N4X5 818 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 FITM2Q8N6M3 262 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 GBP7Q8N8V2 638 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-204ENST00000459639 SKA2Q8WVK7 121 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-204ENST00000459639 STON2Q8WXE9 905 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 SKA1Q96BD8 255 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 FAR2Q96K12 515 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 SHCBP1LQ9BZQ2 653 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 BTBD1Q9H0C5 482 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 CD93Q9NPY3 652 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 ITM2CQ9NQX7 267 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 HEY2Q9UBP5 337 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 PCTPQ9UKL6 214 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 FBXL21Q9UKT6 434 aa23.94■■□□□ 1.42
U2AF1-204ENST00000459639 GFYI3L273 518 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 PBLDP30039 288 aaPredicted RBP23.93■■□□□ 1.42
U2AF1-204ENST00000459639 IGFALSP35858 605 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms