RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SLC25A51Q9H1U9 297 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 KIR3DX1Q9H7L2 352 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 IL26Q9NPH9 171 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
HMGN1-208ENST00000443046 C1GALT1Q9NS00 363 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 ANAPC7Q9UJX3 599 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 POMT2Q9UKY4 750 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 ITPR3Q14573 2671 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 OR6C74A6NCV1 312 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 SLC9B1P1A6NJY1 282 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 KRT38O76015 456 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 SLC4A1P02730 911 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 CYP1A2P05177 515 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 SKILP12757 684 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 ZRSR2Q15696 482 aaKnown RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 HADHQ16836 314 aaKnown RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 DCAF10Q5QP82 559 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 LYPLAL1Q5VWZ2 237 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 TMEM220Q6QAJ8 160 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 CUZD1Q86UP6 607 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 NT5DC3Q86UY8 548 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 GALNT16Q8N428 558 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 KCTD6Q8NC69 237 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 DDHD1Q8NEL9 900 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 TTC25Q96NG3 672 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 ILKAPQ9H0C8 392 aaPredicted RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 ACTR5Q9H9F9 607 aaPredicted RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 BPIFA1Q9NP55 256 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 IMP3Q9NV31 184 aaKnown RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 SOHLH2Q9NX45 425 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 CFAP20Q9Y6A4 193 aaKnown RBP14□□□□□ -0.17
HMGN1-208ENST00000443046 PCM1Q15154 2024 aa14□□□□□ -0.17
HMGN1-208ENST00000443046 SVILO95425 2214 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 TMEM150CB9EJG8 249 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 F5H423 210 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 MYO1FO00160 1098 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 GAPDHSO14556 408 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 NDST3O95803 873 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 ALPPP05187 535 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 GRNP28799 593 aaKnown RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 ADCY2Q08462 1091 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 SSPNQ14714 243 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 PTCHD3Q3KNS1 767 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 LDLRAP1Q5SW96 308 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 HGSNATQ68CP4 663 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 DUS1LQ6P1R4 473 aaKnown RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 KCNMB4Q86W47 210 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 TTC30BQ8N4P2 665 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 PLD5Q8N7P1 536 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 GDAP1Q8TB36 358 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 MOCOSQ96EN8 888 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 FER1L6-AS2Q96M78 137 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 PITPNM3Q9BZ71 974 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 ZCCHC2Q9C0B9 1178 aaKnown RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 FANCEQ9HB96 536 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 ZBTB20Q9HC78 741 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-208ENST00000443046 DOCK10Q96BY6 2186 aa13.99□□□□□ -0.17
HMGN1-208ENST00000443046 MGAT4DA6NG13 374 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 OR2AG2A6NM03 316 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 E2F3O00716 465 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 DDX3YO15523 660 aaKnown RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 LRRTM2O43300 516 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A9O60656 530 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 KLHL41O60662 606 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 IPO13O94829 963 aaKnown RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A6P19224 532 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 POLR2CP19387 275 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A1P22309 533 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A4P22310 534 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 ARCN1P48444 511 aaKnown RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 XRCC4Q13426 336 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 PCSK7Q16549 785 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 SP5Q6BEB4 398 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 MAP7D3Q8IWC1 876 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 SPATA22Q8NHS9 363 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 C12orf66Q96MD2 445 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 RNF157Q96PX1 679 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 CEP41Q9BYV8 373 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 WWP1Q9H0M0 922 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A7Q9HAW7 530 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A10Q9HAW8 530 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 UGT1A8Q9HAW9 530 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 SMOXQ9NWM0 555 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGN1-208ENST00000443046 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 SERTAD3Q9UJW9 196 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 ACSL5Q9ULC5 683 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 PADI2Q9Y2J8 665 aa13.98□□□□□ -0.17
HMGN1-208ENST00000443046 CCDC168Q8NDH2 2452 aa13.97□□□□□ -0.17
HMGN1-208ENST00000443046 LOC285095A0A1B0GVY8 99 aa13.97□□□□□ -0.17
HMGN1-208ENST00000443046 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
HMGN1-208ENST00000443046 H3BMH7 237 aa13.97□□□□□ -0.17
HMGN1-208ENST00000443046 MATN2O00339 956 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms