RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CXorf40BQ96DE9 158 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 LIN37Q96GY3 246 aaPredicted RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 RMDN2Q96LZ7 410 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TMEM74Q96NL1 305 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 INSM2Q96T92 566 aaPredicted RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 NAT9Q9BTE0 207 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 CARD6Q9BX69 1037 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TRIM31Q9BZY9 425 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 WWP1Q9H0M0 922 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 WHRNQ9P202 907 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 PDP2Q9P2J9 529 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 PSMD13Q9UNM6 376 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 MAD1L1Q9Y6D9 718 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 CELSR3Q9NYQ7 3312 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 PRAMEF33A0A0G2JMD5 474 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 A0A1W2PNU3 283 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 SLC5A10A0PJK1 596 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 GOLGA8KD6RF30 607 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 GOLGA8TH3BQL2 631 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 LIN7AO14910 233 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 BANF1O75531 89 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 TTC4O95801 387 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 POLBP06746 335 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 MTHFD1P11586 935 aaKnown RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 PGAM1P18669 254 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 CSF2RBP32927 897 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 CD151P48509 253 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 MRPS25P82663 173 aaKnown RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 NKAIN2Q5VXU1 208 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 WDR74Q6RFH5 385 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 SDCCAG8Q86SQ7 713 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 CILP2Q8IUL8 1156 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 IGDCC3Q8IVU1 814 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 PDIK1LQ8N165 341 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 KDF1Q8NAX2 398 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 BBOF1Q8ND07 529 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 OR4D9Q8NGE8 314 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 OR10G6Q8NH81 332 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 LPGAT1Q92604 370 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 LRRC39Q96DD0 335 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 ATXN7L3BQ96GX2 97 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 CNTNAP3BQ96NU0 1288 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 NUDT22Q9BRQ3 303 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 WDR83Q9BRX9 315 aaKnown RBP17.96■□□□□ 0.47
HLA-F-220ENST00000434407 TBC1D10AQ9BXI6 508 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 CNTNAP3Q9BZ76 1288 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 SYNDIG1Q9H7V2 258 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 RDH14Q9HBH5 336 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 PLAC1Q9HBJ0 212 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 SNX24Q9Y343 169 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 MRFAP1Q9Y605 127 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 TEX264Q9Y6I9 313 aa17.96■□□□□ 0.47
HLA-F-220ENST00000434407 ZZEF1O43149 2961 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 TMEM8BA6NDV4 472 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 E7ESA3 106 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 DUX1O43812 170 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 NDUFS3O75489 264 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 PROS1P07225 676 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 SLC35G4P0C7Q5 338 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 PDHA2P29803 388 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 LIMK2P53671 638 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 INHBCP55103 352 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 PLOD1Q02809 727 aaPredicted RBP17.95■□□□□ 0.46
HLA-F-220ENST00000434407 GPR18Q14330 331 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 CRYMQ14894 314 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 HIF1AQ16665 826 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 BBS9Q3SYG4 887 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 RNF187Q5TA31 235 aaPredicted RBP17.95■□□□□ 0.46
HLA-F-220ENST00000434407 USP53Q70EK8 1073 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 CENPUQ71F23 418 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 LMNTD2Q8IXW0 634 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 C12orf66Q96MD2 445 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 PWWP2AQ96N64 755 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 BIRC8Q96P09 236 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 FOXP3Q9BZS1 431 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 GRHL1Q9NZI5 618 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 IL1RAPL1Q9NZN1 696 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 OGFRQ9NZT2 677 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 FAM8A1Q9UBU6 413 aa17.95■□□□□ 0.46
HLA-F-220ENST00000434407 S1PR4O95977 384 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 HOXB3P14651 431 aaPredicted RBP17.94■□□□□ 0.46
HLA-F-220ENST00000434407 CCR7P32248 378 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 LSSP48449 732 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 ARL4CP56559 192 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 MAP9Q49MG5 647 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 STEAP4Q687X5 459 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 TMEM71Q6P5X7 295 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 IGF2-ASQ6U949 168 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.94■□□□□ 0.46
HLA-F-220ENST00000434407 LKAAEAR1Q8TD35 194 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 ELMO1Q92556 727 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 ZNF592Q92610 1267 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 NXPE2Q96DL1 559 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 PRR11Q96HE9 360 aaPredicted RBP17.94■□□□□ 0.46
HLA-F-220ENST00000434407 SEMA6CQ9H3T2 930 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 EPB41L5Q9HCM4 733 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 INTS10Q9NVR2 710 aaKnown RBP17.94■□□□□ 0.46
HLA-F-220ENST00000434407 GNPTGQ9UJJ9 305 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms