RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 C6orf132Q5T0Z8 1188 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 AGAP9Q5VTM2 703 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 WASH2PQ6VEQ5 465 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 CFAP206Q8IYR0 622 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 GPATCH11Q8N954 259 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 SLC44A1Q8WWI5 657 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 FAM136AQ96C01 138 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 PAFAH2Q99487 392 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 DUSP23Q9BVJ7 150 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 WASH6PQ9NQA3 447 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 LATS2Q9NRM7 1088 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 GALPQ9UBC7 116 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 ACSL5Q9ULC5 683 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 EXOC1LA0A1B0GW35 172 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 FAM95CA0A1B0GW59 222 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 CCDC151A5D8V7 595 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 B4DGG1 531 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 KPNA5O15131 536 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 VPS26AO75436 327 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 GPC4O75487 556 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 F3P13726 295 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 CHRM3P20309 590 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 CD9P21926 228 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 FDXRP22570 491 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-202ENST00000422991 PREPP48147 710 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 GBX1Q14549 363 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 TMED2Q15363 201 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 SEPT7Q16181 437 aaKnown RBP16.65■□□□□ 0.26
COL7A1-202ENST00000422991 HECTD2Q5U5R9 776 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 FAM45BPQ6NSW5 357 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ZCCHC8Q6NZY4 707 aaKnown RBP16.65■□□□□ 0.26
COL7A1-202ENST00000422991 NAPRTQ6XQN6 538 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 OTOAQ7RTW8 1153 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 NAXDQ8IW45 347 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ZBTB2Q8N680 514 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 EID2Q8N6I1 236 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 KYQ8NBH2 561 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 GIMAP7Q8NHV1 300 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 FAM45AQ8TCE6 357 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ZDHHC1Q8WTX9 485 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ASZ1Q8WWH4 475 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 MRRFQ96E11 262 aaKnown RBP16.65■□□□□ 0.26
COL7A1-202ENST00000422991 ELMO2Q96JJ3 720 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 GPR21Q99679 349 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 GPR22Q99680 433 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 SLC30A3Q99726 388 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 OLFM1Q99784 485 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 OR52A5Q9H2C5 316 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 DPEP2Q9H4A9 486 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 SARS2Q9NP81 518 aaKnown RBP16.65■□□□□ 0.26
COL7A1-202ENST00000422991 KLHL42Q9P2K6 505 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 CDYLQ9Y232 598 aa16.65■□□□□ 0.26
COL7A1-202ENST00000422991 PDZK1P1A8MUH7 402 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 SIGLEC6O43699 453 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 NOBOXO60393 691 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 ERLIN1O75477 346 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 APOA4P06727 396 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 INHBAP08476 426 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 BRAFP15056 766 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 RPL10P27635 214 aaKnown RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 PDHA2P29803 388 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 PLOD1Q02809 727 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 PLEKHS1Q5SXH7 462 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 OGFOD3Q6PK18 319 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 ABRAXAS1Q6UWZ7 409 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 PIM3Q86V86 326 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 SFTPA2Q8IWL1 248 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 NAGSQ8N159 534 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 FAM181AQ8N9Y4 354 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 SIDT2Q8NBJ9 832 aaKnown RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 CD200R1Q8TD46 325 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 DCAKDQ8WVC6 231 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 GLMNQ92990 594 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 TMEM159Q96B96 161 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 RMDN2Q96LZ7 410 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 DHRS4Q9BTZ2 278 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 WWP1Q9H0M0 922 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 TAS2R13Q9NYV9 303 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 SCHIP1Q9P0W5 487 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 SIRPGQ9P1W8 387 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 FETUBQ9UGM5 382 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 WDR37Q9Y2I8 494 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 MTO1Q9Y2Z2 717 aaKnown RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 VWA7Q9Y334 891 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 DHRS7Q9Y394 339 aa16.64■□□□□ 0.25
COL7A1-202ENST00000422991 GOLGA4Q13439 2230 aaKnown RBP16.64■□□□□ 0.25
COL7A1-202ENST00000422991 DCDC2BA2VCK2 349 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 POC1B-GALNT4F8VUJ3 575 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SH3BP5O60239 455 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SLCO2B1O94956 709 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SHBGP04278 402 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 ITGA2BP08514 1039 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SLC35G4P0C7Q5 338 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SLC2A4P14672 509 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 GCAP28676 217 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms