RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PGAP3Q96FM1 320 aaPredicted RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 PGM2Q96G03 612 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF274Q96GC6 653 aaPredicted RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 TMEM169Q96HH4 297 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 DNAJC1Q96KC8 554 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF285Q96NJ3 590 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 CCNL2Q96S94 520 aaPredicted RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 KCNK16Q96T55 309 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 PSD2Q9BQI7 771 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 SF3B5Q9BWJ5 86 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 GON7Q9BXV9 100 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 LRMDAQ9H2I8 198 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 MTIF3Q9H2K0 278 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 VCX2Q9H322 139 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 HIPK3Q9H422 1215 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 EXO5Q9H790 373 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 CYP3A43Q9HB55 503 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 DIABLOQ9NR28 239 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 SERINC1Q9NRX5 453 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 ETNK2Q9NVF9 386 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 EXD2Q9NVH0 621 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 THG1LQ9NWX6 298 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 TAS2R10Q9NYW0 307 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 SMARCAL1Q9NZC9 954 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 SELENONQ9NZV5 590 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 TRMT6Q9UJA5 497 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 FEM1BQ9UK73 627 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 ADAM21Q9UKJ8 722 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 VPS4AQ9UN37 437 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 GINS2Q9Y248 185 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 ERGIC3Q9Y282 383 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 IFT52Q9Y366 437 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 MRPS2Q9Y399 296 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 HBS1LQ9Y450 684 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 PCDHGA7Q9Y5G6 932 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 GRIN2DO15399 1336 aa3.91□□□□□ -1.78
LINC01048-201ENST00000414480 FLNBO75369 2602 aaKnown RBP3.91□□□□□ -1.78
LINC01048-201ENST00000414480 FAM237AA0A1B0GTK4 181 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 TEX51A0A1B0GUA7 166 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 A0A1W2PQ09 198 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 A0A1W2PQH9 124 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ESYT2A0FGR8 921 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PLK4O00444 970 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PRRG1O14668 218 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 INPPL1O15357 1258 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CLOCKO15516 846 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 LRRTM2O43300 516 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SUSD5O60279 629 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 NOBOXO60393 691 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PLA2G6O60733 806 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 RHBDL1O75783 438 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 RHOBTB1O94844 696 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 TNFRSF6BO95407 300 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 NSA2O95478 260 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SYF2O95926 243 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 DHFRP00374 187 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CST3P01034 146 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PDGFBP01127 241 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 LDLRP01130 860 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 TGFAP01135 160 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CSF2P04141 144 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SOD2P04179 222 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ALDH2P05091 517 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 HMBSP08397 361 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ARP10275 920 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 HOXB8P17481 243 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PLCG1P19174 1290 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 MX1P20591 662 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 HNF1AP20823 631 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CYP7A1P22680 504 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CPT2P23786 658 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ADRA1DP25100 572 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 GSTM2P28161 218 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ABCD3P28288 659 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CDC25AP30304 524 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 GSTT1P30711 240 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SLC5A2P31639 672 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 MDH1P40925 334 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ALDH3B1P43353 468 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SLC1A6P48664 564 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 SLC11A1P49279 550 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CCR4P51679 360 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 RAD23BP54727 409 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PDE1AP54750 535 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PSMD4P55036 377 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CCL23P55773 120 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 ATP5IP56385 69 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 YPEL5P62699 121 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 RPL10AP62906 217 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 TNNC1P63316 161 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 DLG4P78352 724 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 REEP5Q00765 189 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 MADCAM1Q13477 382 aa3.9□□□□□ -1.79
LINC01048-201ENST00000414480 CAMK2GQ13555 558 aaPredicted RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 DCTN2Q13561 401 aaKnown RBP3.9□□□□□ -1.79
LINC01048-201ENST00000414480 PUM1Q14671 1186 aaKnown RBP eCLIP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms