RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MC4RP32245 332 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 ARL2P36404 184 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CAPZA2P47755 286 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 TMEM236Q5W0B7 351 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 GTPBP2Q9BX10 602 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 AGO3Q9H9G7 860 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 RPL36Q9Y3U8 105 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CCNB2O95067 398 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CCNYL3P0C7X3 344 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 FPR1P21462 350 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PBLDP30039 288 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 MMAAQ8IVH4 418 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 UCKL1Q9NWZ5 548 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 TAS2R9Q9NYW1 312 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 FZD10Q9ULW2 581 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 MATN3O15232 486 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 STK16O75716 305 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 GABARAPL2P60520 117 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 RABL3Q5HYI8 236 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 PRAMEF18Q5VWM3 479 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF641Q96N77 438 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 TCF25Q9BQ70 676 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 KCNK13Q9HB14 408 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 SDHDO14521 159 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 MT-CYBP00156 380 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 IL7P13232 177 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 HOXA10P31260 410 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 DNAJB13P59910 316 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 HACD2Q6Y1H2 254 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 CHMP1BQ7LBR1 199 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 OR4A15Q8NGL6 344 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF486Q96H40 463 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 KCTD7Q96MP8 289 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 TNNI3P19429 210 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 CD40LGP29965 261 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 RFX3P48380 749 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 IFI44LQ53G44 452 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 XKR6Q5GH73 641 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 IFNLR1Q8IU57 520 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 SLC7A5P1Q8MH63 180 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 LIX1Q8N485 282 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 SLC38A4Q969I6 547 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 MED11Q9P086 117 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 PSAT1Q9Y617 370 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 UGT2B17O75795 530 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 CYP20A1Q6UW02 462 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 IGFN1Q86VF2 1251 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 AMIGO1Q86WK6 493 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 CLIP4Q8N3C7 705 aa17.43■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF655Q8N720 491 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF431Q8TF32 576 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 OAS3Q9Y6K5 1087 aaKnown RBP17.43■□□□□ 0.38
SMPD4-202ENST00000409031 KAT6AQ92794 2004 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 MATN1P21941 496 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 RFC2P35250 354 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 RAP1GAP2Q684P5 730 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF280DQ6N043 979 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 TRIM48Q8IWZ4 208 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 TOP6BLQ8N6T0 577 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 SLC37A3Q8NCC5 494 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 KLHL5Q96PQ7 755 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 HBEGFQ99075 208 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 MNTQ99583 582 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GULP1Q9UBP9 304 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 H7C4K7 107 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 AHSGP02765 367 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 RLN1P04808 185 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF286BP0CG31 522 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.389e-6■■□□□ 13.3
SMPD4-202ENST00000409031 DCST1Q5T197 706 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GARNL3Q5VVW2 1013 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 PLD6Q8N2A8 252 aaKnown RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 UFD1Q92890 307 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF597Q96LX8 424 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 BHMG1C9JSJ3 638 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 DLGAP1O14490 977 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 SOCS2O14508 198 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 PDPK1O15530 556 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 NUAK1O60285 661 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 CLDN9O95484 217 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF267Q14586 743 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 FBXO48Q5FWF7 155 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ANKRD49Q8WVL7 239 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 PPCDCQ96CD2 204 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 SMURF2Q9HAU4 748 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 BPIFA1Q9NP55 256 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 EIF2B4Q9UI10 523 aaKnown RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GABRDO14764 452 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 OGNP20774 298 aaKnown RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 CYP3A5P20815 502 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ERP29P30040 261 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms