RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HNRNPA1L2Q32P51 320 aaKnown RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 LY6G5CQ5SRR4 150 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 MANEALQ5VSG8 457 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF776Q68DI1 518 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CCSAPQ6IQ19 270 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 OGFOD2Q6N063 350 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 C11orf74Q86VG3 221 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 C3orf58Q8NDZ4 430 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 OR6Y1Q8NGX8 325 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 GPR21Q99679 349 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 IRAK4Q9NWZ3 460 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SLC9A8Q9Y2E8 581 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 GSAPA4D1B5 854 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 TSPAN3O60637 253 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SPDYE7PQ495Y7 208 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 LIPJQ5W064 366 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 IFNEQ86WN2 208 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 TRPV1Q8NER1 839 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM209Q96SK2 561 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 C8orf33Q9H7E9 229 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 DNMT3AQ9Y6K1 912 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 RHOP08100 348 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 STXBP1P61764 594 aaKnown RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ABATP80404 500 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CES3Q6UWW8 571 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ISL2Q96A47 359 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 MED8Q96G25 268 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ACOX2Q99424 681 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CLSTN3Q9BQT9 956 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 OSBPL7Q9BZF2 842 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SEMA4BQ9NPR2 832 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 C1orf109Q9NX04 203 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 PLK2Q9NYY3 685 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 IL17CQ9P0M4 197 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 FRMPD3Q5JV73 1810 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SCN5AQ14524 2016 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 FAM220BPB1ANY3 271 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 MGRN1O60291 552 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 RNASEH2AO75792 299 aaKnown RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 COX7A2P14406 83 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 LRRC32Q14392 662 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CPSF6Q16630 551 aaKnown RBP eCLIP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 KCTD11Q693B1 232 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SZRD1Q7Z422 152 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 NLRP8Q86W28 1048 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 FBXW8Q8N3Y1 598 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ADCY4Q8NFM4 1077 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 HERVK_113Q902F9 699 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ELMO3Q96BJ8 720 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 TEFMQ96QE5 360 aaKnown RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 FAM83CQ9BQN1 747 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SLC7A5P2Q9GIP4 190 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 WDR26Q9H7D7 661 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ZBTB26Q9HCK0 441 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 IFT80Q9P2H3 777 aaPredicted RBP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CLCA2Q9UQC9 943 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 MYLKQ15746 1914 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 APBB3O95704 486 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GUCA1CO95843 209 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 IGLV3-27P01718 113 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CTSEP14091 401 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SLC6A2P23975 617 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 BUD31P41223 144 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CCT8P50990 548 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NIPAL4Q0D2K0 466 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 XKR6Q5GH73 641 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 HORMAD1Q86X24 394 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NR4A3Q92570 626 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 RMND5BQ96G75 393 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PIWIL1Q96J94 861 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MRGPRX2Q96LB1 330 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PAAF1Q9BRP4 392 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 IPPKQ9H8X2 491 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 WBP1LQ9NX94 342 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KLQ9UEF7 1012 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 IL36AQ9UHA7 158 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 LEFTY2O00292 366 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TGM5O43548 720 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CLPTM1O96005 669 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ATXN1P54253 815 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KRR1Q13601 381 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 UBE2R2Q712K3 238 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 DHDDSQ86SQ9 333 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 DCP2Q8IU60 420 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PACRGLQ8N7B6 248 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ITFG1Q8TB96 612 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KCTD4Q8WVF5 259 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SPACA7Q96KW9 195 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 Q96MT0 163 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SPATA9Q9BWV2 254 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TREX1Q9NSU2 369 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SUCOQ9UBS9 1254 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 A0A0D9SEW6 157 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SMIM31A0A1B0GVY4 71 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 A0A1W2PPM1 405 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 DHRS12A0PJE2 317 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 F8W810 466 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 COX4I1P13073 169 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms